Gene : Tp57577_TGAC_v2_gene20240 T. pratense v2
Defline:  (1 of 1) K13427 - nitric-oxide synthase, plant (NOA1) Genomic Order:  2145
Name:  ? Tp57577_TGAC_v2_gene20240 Secondary Identifier:  ? PAC:35966085
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6845 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene20240 0.5kb upstream 0.5kb upstream 6747 true Tp57577_TGAC_v2_LG4: 20301938-20308684 Trifolium pratense
Tp57577_TGAC_v2_gene20240 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 20308185-20308684 Trifolium pratense
Tp57577_TGAC_v2_gene20240 0.5kb downstream 0.5kb downstream 6747 true Tp57577_TGAC_v2_LG4: 20301438-20308184 Trifolium pratense
Tp57577_TGAC_v2_gene20240 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 20301438-20301937 Trifolium pratense
Tp57577_TGAC_v2_gene20240 1.0kb upstream 1.0kb upstream 7247 true Tp57577_TGAC_v2_LG4: 20301938-20309184 Trifolium pratense
Tp57577_TGAC_v2_gene20240 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 20308185-20309184 Trifolium pratense
Tp57577_TGAC_v2_gene20240 1.0kb downstream 1.0kb downstream 7247 true Tp57577_TGAC_v2_LG4: 20300938-20308184 Trifolium pratense
Tp57577_TGAC_v2_gene20240 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 20300938-20301937 Trifolium pratense
Tp57577_TGAC_v2_gene20240 2.0kb upstream 2.0kb upstream 8247 true Tp57577_TGAC_v2_LG4: 20301938-20310184 Trifolium pratense
Tp57577_TGAC_v2_gene20240 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 20308185-20310184 Trifolium pratense
Tp57577_TGAC_v2_gene20240 2.0kb downstream 2.0kb downstream 8247 true Tp57577_TGAC_v2_LG4: 20299938-20308184 Trifolium pratense
Tp57577_TGAC_v2_gene20240 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 20299938-20301937 Trifolium pratense
Tp57577_TGAC_v2_gene20240 5.0kb upstream 5.0kb upstream 11247 true Tp57577_TGAC_v2_LG4: 20301938-20313184 Trifolium pratense
Tp57577_TGAC_v2_gene20240 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 20308185-20313184 Trifolium pratense
Tp57577_TGAC_v2_gene20240 5.0kb downstream 5.0kb downstream 11247 true Tp57577_TGAC_v2_LG4: 20296938-20308184 Trifolium pratense
Tp57577_TGAC_v2_gene20240 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 20296938-20301937 Trifolium pratense
Tp57577_TGAC_v2_gene20240 10.0kb upstream 10.0kb upstream 16247 true Tp57577_TGAC_v2_LG4: 20301938-20318184 Trifolium pratense
Tp57577_TGAC_v2_gene20240 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 20308185-20318184 Trifolium pratense
Tp57577_TGAC_v2_gene20240 10.0kb downstream 10.0kb downstream 16247 true Tp57577_TGAC_v2_LG4: 20291938-20308184 Trifolium pratense
Tp57577_TGAC_v2_gene20240 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 20291938-20301937 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306553 5265 Fabidae View MSA
124065366 5270 Rosid View MSA
123739170 5271 Pentapetalae View MSA
122792557 5272 Eudicot View MSA
122045244 5273 Angiosperm View MSA
121346425 5274 Embryophyte View MSA
123426230 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain