Gene : Tp57577_TGAC_v2_gene17161 T. pratense v2
Defline:  (1 of 2) 2.5.1.87 - Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyl diphosphate specific) / Rer2p Z-prenyltransferase Genomic Order:  2254
Name:  ? Tp57577_TGAC_v2_gene17161 Secondary Identifier:  ? PAC:35987455
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6129 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene17161 0.5kb upstream 0.5kb upstream 6368 true Tp57577_TGAC_v2_LG3: 18792550-18798917 Trifolium pratense
Tp57577_TGAC_v2_gene17161 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 18792550-18793049 Trifolium pratense
Tp57577_TGAC_v2_gene17161 0.5kb downstream 0.5kb downstream 6368 true Tp57577_TGAC_v2_LG3: 18793050-18799417 Trifolium pratense
Tp57577_TGAC_v2_gene17161 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 18798918-18799417 Trifolium pratense
Tp57577_TGAC_v2_gene17161 1.0kb upstream 1.0kb upstream 6868 true Tp57577_TGAC_v2_LG3: 18792050-18798917 Trifolium pratense
Tp57577_TGAC_v2_gene17161 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 18792050-18793049 Trifolium pratense
Tp57577_TGAC_v2_gene17161 1.0kb downstream 1.0kb downstream 6868 true Tp57577_TGAC_v2_LG3: 18793050-18799917 Trifolium pratense
Tp57577_TGAC_v2_gene17161 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 18798918-18799917 Trifolium pratense
Tp57577_TGAC_v2_gene17161 2.0kb upstream 2.0kb upstream 7868 true Tp57577_TGAC_v2_LG3: 18791050-18798917 Trifolium pratense
Tp57577_TGAC_v2_gene17161 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 18791050-18793049 Trifolium pratense
Tp57577_TGAC_v2_gene17161 2.0kb downstream 2.0kb downstream 7868 true Tp57577_TGAC_v2_LG3: 18793050-18800917 Trifolium pratense
Tp57577_TGAC_v2_gene17161 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 18798918-18800917 Trifolium pratense
Tp57577_TGAC_v2_gene17161 5.0kb upstream 5.0kb upstream 10868 true Tp57577_TGAC_v2_LG3: 18788050-18798917 Trifolium pratense
Tp57577_TGAC_v2_gene17161 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 18788050-18793049 Trifolium pratense
Tp57577_TGAC_v2_gene17161 5.0kb downstream 5.0kb downstream 10868 true Tp57577_TGAC_v2_LG3: 18793050-18803917 Trifolium pratense
Tp57577_TGAC_v2_gene17161 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 18798918-18803917 Trifolium pratense
Tp57577_TGAC_v2_gene17161 10.0kb upstream 10.0kb upstream 15868 true Tp57577_TGAC_v2_LG3: 18783050-18798917 Trifolium pratense
Tp57577_TGAC_v2_gene17161 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 18783050-18793049 Trifolium pratense
Tp57577_TGAC_v2_gene17161 10.0kb downstream 10.0kb downstream 15868 true Tp57577_TGAC_v2_LG3: 18793050-18808917 Trifolium pratense
Tp57577_TGAC_v2_gene17161 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 18798918-18808917 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306673 5265 Fabidae View MSA
124061993 5270 Rosid View MSA
123744162 5271 Pentapetalae View MSA
122791831 5272 Eudicot View MSA
122045568 5273 Angiosperm View MSA
121310466 5274 Embryophyte View MSA
123347940 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain