Gene : Tp57577_TGAC_v2_gene37890 T. pratense v2
Defline:  (1 of 2) 2.5.1.87 - Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyl diphosphate specific) / Rer2p Z-prenyltransferase Genomic Order:  3622
Name:  ? Tp57577_TGAC_v2_gene37890 Secondary Identifier:  ? PAC:35970750
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6129 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene37890 0.5kb upstream 0.5kb upstream 4257 true Tp57577_TGAC_v2_LG2: 31921021-31925277 Trifolium pratense
Tp57577_TGAC_v2_gene37890 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 31924778-31925277 Trifolium pratense
Tp57577_TGAC_v2_gene37890 0.5kb downstream 0.5kb downstream 4257 true Tp57577_TGAC_v2_LG2: 31920521-31924777 Trifolium pratense
Tp57577_TGAC_v2_gene37890 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 31920521-31921020 Trifolium pratense
Tp57577_TGAC_v2_gene37890 1.0kb upstream 1.0kb upstream 4757 true Tp57577_TGAC_v2_LG2: 31921021-31925777 Trifolium pratense
Tp57577_TGAC_v2_gene37890 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 31924778-31925777 Trifolium pratense
Tp57577_TGAC_v2_gene37890 1.0kb downstream 1.0kb downstream 4757 true Tp57577_TGAC_v2_LG2: 31920021-31924777 Trifolium pratense
Tp57577_TGAC_v2_gene37890 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 31920021-31921020 Trifolium pratense
Tp57577_TGAC_v2_gene37890 2.0kb upstream 2.0kb upstream 5757 true Tp57577_TGAC_v2_LG2: 31921021-31926777 Trifolium pratense
Tp57577_TGAC_v2_gene37890 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 31924778-31926777 Trifolium pratense
Tp57577_TGAC_v2_gene37890 2.0kb downstream 2.0kb downstream 5757 true Tp57577_TGAC_v2_LG2: 31919021-31924777 Trifolium pratense
Tp57577_TGAC_v2_gene37890 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 31919021-31921020 Trifolium pratense
Tp57577_TGAC_v2_gene37890 5.0kb upstream 5.0kb upstream 8757 true Tp57577_TGAC_v2_LG2: 31921021-31929777 Trifolium pratense
Tp57577_TGAC_v2_gene37890 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 31924778-31929777 Trifolium pratense
Tp57577_TGAC_v2_gene37890 5.0kb downstream 5.0kb downstream 8757 true Tp57577_TGAC_v2_LG2: 31916021-31924777 Trifolium pratense
Tp57577_TGAC_v2_gene37890 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 31916021-31921020 Trifolium pratense
Tp57577_TGAC_v2_gene37890 10.0kb upstream 10.0kb upstream 13757 true Tp57577_TGAC_v2_LG2: 31921021-31934777 Trifolium pratense
Tp57577_TGAC_v2_gene37890 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 31924778-31934777 Trifolium pratense
Tp57577_TGAC_v2_gene37890 10.0kb downstream 10.0kb downstream 13757 true Tp57577_TGAC_v2_LG2: 31911021-31924777 Trifolium pratense
Tp57577_TGAC_v2_gene37890 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 31911021-31921020 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306673 5265 Fabidae View MSA
124061993 5270 Rosid View MSA
123744162 5271 Pentapetalae View MSA
122791831 5272 Eudicot View MSA
122045568 5273 Angiosperm View MSA
121310466 5274 Embryophyte View MSA
123347940 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain