Gene : Tp57577_TGAC_v2_gene17289 T. pratense v2
Defline:  (1 of 2) 2.5.1.22 - Spermine synthase / Spermidine aminopropyltransferase Genomic Order:  950
Name:  ? Tp57577_TGAC_v2_gene17289 Secondary Identifier:  ? PAC:35969598
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense ARGSPECAT-PWY Trifolium pratense pathologic  
Tpratense BSUBPOLYAMSYN-PWY Trifolium pratense pathologic  
Tpratense POLYAMINSYN3-PWY Trifolium pratense pathologic  
Tpratense PWY-7528 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene17289 0.5kb upstream 0.5kb upstream 6360 true Tp57577_TGAC_v2_LG2: 9354316-9360675 Trifolium pratense
Tp57577_TGAC_v2_gene17289 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 9360176-9360675 Trifolium pratense
Tp57577_TGAC_v2_gene17289 0.5kb downstream 0.5kb downstream 6360 true Tp57577_TGAC_v2_LG2: 9353816-9360175 Trifolium pratense
Tp57577_TGAC_v2_gene17289 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 9353816-9354315 Trifolium pratense
Tp57577_TGAC_v2_gene17289 1.0kb upstream 1.0kb upstream 6860 true Tp57577_TGAC_v2_LG2: 9354316-9361175 Trifolium pratense
Tp57577_TGAC_v2_gene17289 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 9360176-9361175 Trifolium pratense
Tp57577_TGAC_v2_gene17289 1.0kb downstream 1.0kb downstream 6860 true Tp57577_TGAC_v2_LG2: 9353316-9360175 Trifolium pratense
Tp57577_TGAC_v2_gene17289 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 9353316-9354315 Trifolium pratense
Tp57577_TGAC_v2_gene17289 2.0kb upstream 2.0kb upstream 7860 true Tp57577_TGAC_v2_LG2: 9354316-9362175 Trifolium pratense
Tp57577_TGAC_v2_gene17289 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 9360176-9362175 Trifolium pratense
Tp57577_TGAC_v2_gene17289 2.0kb downstream 2.0kb downstream 7860 true Tp57577_TGAC_v2_LG2: 9352316-9360175 Trifolium pratense
Tp57577_TGAC_v2_gene17289 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 9352316-9354315 Trifolium pratense
Tp57577_TGAC_v2_gene17289 5.0kb upstream 5.0kb upstream 10860 true Tp57577_TGAC_v2_LG2: 9354316-9365175 Trifolium pratense
Tp57577_TGAC_v2_gene17289 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 9360176-9365175 Trifolium pratense
Tp57577_TGAC_v2_gene17289 5.0kb downstream 5.0kb downstream 10860 true Tp57577_TGAC_v2_LG2: 9349316-9360175 Trifolium pratense
Tp57577_TGAC_v2_gene17289 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 9349316-9354315 Trifolium pratense
Tp57577_TGAC_v2_gene17289 10.0kb upstream 10.0kb upstream 15860 true Tp57577_TGAC_v2_LG2: 9354316-9370175 Trifolium pratense
Tp57577_TGAC_v2_gene17289 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 9360176-9370175 Trifolium pratense
Tp57577_TGAC_v2_gene17289 10.0kb downstream 10.0kb downstream 15860 true Tp57577_TGAC_v2_LG2: 9344316-9360175 Trifolium pratense
Tp57577_TGAC_v2_gene17289 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 9344316-9354315 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304285 5265 Fabidae View MSA
124062886 5270 Rosid View MSA
123739892 5271 Pentapetalae View MSA
122785821 5272 Eudicot View MSA
122045666 5273 Angiosperm View MSA
121310481 5274 Embryophyte View MSA
123347953 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain