Gene : Tp57577_TGAC_v2_gene2082 T. pratense v2
Defline:  (1 of 1) 2.7.4.7 - Phosphomethylpyrimidine kinase / Hydroxymethylpyrimidine phosphokinase Genomic Order:  2804
Name:  ? Tp57577_TGAC_v2_gene2082 Secondary Identifier:  ? PAC:35970081
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6890 Trifolium pratense pathologic  
Tpratense PWY-6908 Trifolium pratense pathologic  
Tpratense PWY-6910 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene2082 0.5kb upstream 0.5kb upstream 5665 true Tp57577_TGAC_v2_LG2: 25876759-25882423 Trifolium pratense
Tp57577_TGAC_v2_gene2082 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 25876759-25877258 Trifolium pratense
Tp57577_TGAC_v2_gene2082 0.5kb downstream 0.5kb downstream 5665 true Tp57577_TGAC_v2_LG2: 25877259-25882923 Trifolium pratense
Tp57577_TGAC_v2_gene2082 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 25882424-25882923 Trifolium pratense
Tp57577_TGAC_v2_gene2082 1.0kb upstream 1.0kb upstream 6165 true Tp57577_TGAC_v2_LG2: 25876259-25882423 Trifolium pratense
Tp57577_TGAC_v2_gene2082 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 25876259-25877258 Trifolium pratense
Tp57577_TGAC_v2_gene2082 1.0kb downstream 1.0kb downstream 6165 true Tp57577_TGAC_v2_LG2: 25877259-25883423 Trifolium pratense
Tp57577_TGAC_v2_gene2082 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 25882424-25883423 Trifolium pratense
Tp57577_TGAC_v2_gene2082 2.0kb upstream 2.0kb upstream 7165 true Tp57577_TGAC_v2_LG2: 25875259-25882423 Trifolium pratense
Tp57577_TGAC_v2_gene2082 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 25875259-25877258 Trifolium pratense
Tp57577_TGAC_v2_gene2082 2.0kb downstream 2.0kb downstream 7165 true Tp57577_TGAC_v2_LG2: 25877259-25884423 Trifolium pratense
Tp57577_TGAC_v2_gene2082 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 25882424-25884423 Trifolium pratense
Tp57577_TGAC_v2_gene2082 5.0kb upstream 5.0kb upstream 10165 true Tp57577_TGAC_v2_LG2: 25872259-25882423 Trifolium pratense
Tp57577_TGAC_v2_gene2082 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 25872259-25877258 Trifolium pratense
Tp57577_TGAC_v2_gene2082 5.0kb downstream 5.0kb downstream 10165 true Tp57577_TGAC_v2_LG2: 25877259-25887423 Trifolium pratense
Tp57577_TGAC_v2_gene2082 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 25882424-25887423 Trifolium pratense
Tp57577_TGAC_v2_gene2082 10.0kb upstream 10.0kb upstream 15165 true Tp57577_TGAC_v2_LG2: 25867259-25882423 Trifolium pratense
Tp57577_TGAC_v2_gene2082 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 25867259-25877258 Trifolium pratense
Tp57577_TGAC_v2_gene2082 10.0kb downstream 10.0kb downstream 15165 true Tp57577_TGAC_v2_LG2: 25877259-25892423 Trifolium pratense
Tp57577_TGAC_v2_gene2082 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 25882424-25892423 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309007 5265 Fabidae View MSA
124063802 5270 Rosid View MSA
123739977 5271 Pentapetalae View MSA
122792526 5272 Eudicot View MSA
122045389 5273 Angiosperm View MSA
121344045 5274 Embryophyte View MSA
123424693 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain