Gene : Tp57577_TGAC_v2_gene25684 T. pratense v2
Defline:  (1 of 1) K01968 - 3-methylcrotonyl-CoA carboxylase alpha subunit (E6.4.1.4A) Genomic Order:  14
Name:  ? Tp57577_TGAC_v2_gene25684 Secondary Identifier:  ? PAC:35952987
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense LEU-DEG2-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene25684 0.5kb upstream 0.5kb upstream 8508 true Tp57577_TGAC_v2_scaf_169: 117976-126483 Trifolium pratense
Tp57577_TGAC_v2_gene25684 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_169: 117976-118475 Trifolium pratense
Tp57577_TGAC_v2_gene25684 0.5kb downstream 0.5kb downstream 8508 true Tp57577_TGAC_v2_scaf_169: 118476-126983 Trifolium pratense
Tp57577_TGAC_v2_gene25684 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_169: 126484-126983 Trifolium pratense
Tp57577_TGAC_v2_gene25684 1.0kb upstream 1.0kb upstream 9008 true Tp57577_TGAC_v2_scaf_169: 117476-126483 Trifolium pratense
Tp57577_TGAC_v2_gene25684 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_169: 117476-118475 Trifolium pratense
Tp57577_TGAC_v2_gene25684 1.0kb downstream 1.0kb downstream 9008 true Tp57577_TGAC_v2_scaf_169: 118476-127483 Trifolium pratense
Tp57577_TGAC_v2_gene25684 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_169: 126484-127483 Trifolium pratense
Tp57577_TGAC_v2_gene25684 2.0kb upstream 2.0kb upstream 10008 true Tp57577_TGAC_v2_scaf_169: 116476-126483 Trifolium pratense
Tp57577_TGAC_v2_gene25684 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_169: 116476-118475 Trifolium pratense
Tp57577_TGAC_v2_gene25684 2.0kb downstream 2.0kb downstream 10008 true Tp57577_TGAC_v2_scaf_169: 118476-128483 Trifolium pratense
Tp57577_TGAC_v2_gene25684 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_169: 126484-128483 Trifolium pratense
Tp57577_TGAC_v2_gene25684 5.0kb upstream 5.0kb upstream 13008 true Tp57577_TGAC_v2_scaf_169: 113476-126483 Trifolium pratense
Tp57577_TGAC_v2_gene25684 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_169: 113476-118475 Trifolium pratense
Tp57577_TGAC_v2_gene25684 5.0kb downstream 5.0kb downstream 13008 true Tp57577_TGAC_v2_scaf_169: 118476-131483 Trifolium pratense
Tp57577_TGAC_v2_gene25684 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_169: 126484-131483 Trifolium pratense
Tp57577_TGAC_v2_gene25684 10.0kb upstream 10.0kb upstream 18008 true Tp57577_TGAC_v2_scaf_169: 108476-126483 Trifolium pratense
Tp57577_TGAC_v2_gene25684 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_169: 108476-118475 Trifolium pratense
Tp57577_TGAC_v2_gene25684 10.0kb downstream 10.0kb downstream 18008 true Tp57577_TGAC_v2_scaf_169: 118476-136483 Trifolium pratense
Tp57577_TGAC_v2_gene25684 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_169: 126484-136483 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303666 5265 Fabidae View MSA
124062314 5270 Rosid View MSA
123743627 5271 Pentapetalae View MSA
122788393 5272 Eudicot View MSA
122046633 5273 Angiosperm View MSA
121344540 5274 Embryophyte View MSA
123425779 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain