Gene : Tp57577_TGAC_v2_gene27538 T. pratense v2
Defline:  (1 of 1) PTHR11817:SF26 - PLASTIDIAL PYRUVATE KINASE 3, CHLOROPLASTIC Genomic Order:  6
Name:  ? Tp57577_TGAC_v2_gene27538 Secondary Identifier:  ? PAC:35952157
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense ANAEROFRUCAT-PWY Trifolium pratense pathologic  
Tpratense ANAGLYCOLYSIS-PWY Trifolium pratense pathologic  
Tpratense PWY-1042 Trifolium pratense pathologic  
Tpratense PWY-5464 Trifolium pratense pathologic  
Tpratense PWY-5723 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene27538 0.5kb upstream 0.5kb upstream 4403 true Tp57577_TGAC_v2_scaf_1080: 40116-44518 Trifolium pratense
Tp57577_TGAC_v2_gene27538 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_1080: 40116-40615 Trifolium pratense
Tp57577_TGAC_v2_gene27538 0.5kb downstream 0.5kb downstream 4403 true Tp57577_TGAC_v2_scaf_1080: 40616-45018 Trifolium pratense
Tp57577_TGAC_v2_gene27538 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_1080: 44519-45018 Trifolium pratense
Tp57577_TGAC_v2_gene27538 1.0kb upstream 1.0kb upstream 4903 true Tp57577_TGAC_v2_scaf_1080: 39616-44518 Trifolium pratense
Tp57577_TGAC_v2_gene27538 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_1080: 39616-40615 Trifolium pratense
Tp57577_TGAC_v2_gene27538 1.0kb downstream 1.0kb downstream 4903 true Tp57577_TGAC_v2_scaf_1080: 40616-45518 Trifolium pratense
Tp57577_TGAC_v2_gene27538 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_1080: 44519-45518 Trifolium pratense
Tp57577_TGAC_v2_gene27538 2.0kb upstream 2.0kb upstream 5903 true Tp57577_TGAC_v2_scaf_1080: 38616-44518 Trifolium pratense
Tp57577_TGAC_v2_gene27538 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_1080: 38616-40615 Trifolium pratense
Tp57577_TGAC_v2_gene27538 2.0kb downstream 2.0kb downstream 5903 true Tp57577_TGAC_v2_scaf_1080: 40616-46518 Trifolium pratense
Tp57577_TGAC_v2_gene27538 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_1080: 44519-46518 Trifolium pratense
Tp57577_TGAC_v2_gene27538 5.0kb upstream 5.0kb upstream 8903 true Tp57577_TGAC_v2_scaf_1080: 35616-44518 Trifolium pratense
Tp57577_TGAC_v2_gene27538 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_1080: 35616-40615 Trifolium pratense
Tp57577_TGAC_v2_gene27538 5.0kb downstream 5.0kb downstream 8903 true Tp57577_TGAC_v2_scaf_1080: 40616-49518 Trifolium pratense
Tp57577_TGAC_v2_gene27538 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_1080: 44519-49518 Trifolium pratense
Tp57577_TGAC_v2_gene27538 10.0kb upstream 10.0kb upstream 13903 true Tp57577_TGAC_v2_scaf_1080: 30616-44518 Trifolium pratense
Tp57577_TGAC_v2_gene27538 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_1080: 30616-40615 Trifolium pratense
Tp57577_TGAC_v2_gene27538 10.0kb downstream 10.0kb downstream 12546 true Tp57577_TGAC_v2_scaf_1080: 40616-53161 Trifolium pratense
Tp57577_TGAC_v2_gene27538 10.0kb downstream 10.0kb downstream 8643 false Tp57577_TGAC_v2_scaf_1080: 44519-53161 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308516 5265 Fabidae View MSA
124068540 5270 Rosid View MSA
123739414 5271 Pentapetalae View MSA
122792139 5272 Eudicot View MSA
122048641 5273 Angiosperm View MSA
121350965 5274 Embryophyte View MSA
123423965 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain