Gene : Tp57577_TGAC_v2_gene38232 T. pratense v2
Defline:  (1 of 1) PTHR10048:SF15 - PHOSPHATIDYLINOSITOL 4-KINASE ALPHA-LIKE PROTEIN P2-RELATED Genomic Order:  713
Name:  ? Tp57577_TGAC_v2_gene38232 Secondary Identifier:  ? PAC:35957000
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6351 Trifolium pratense pathologic  
Tpratense PWY-6352 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38232 0.5kb upstream 0.5kb upstream 19356 true Tp57577_TGAC_v2_LG7: 5360943-5380298 Trifolium pratense
Tp57577_TGAC_v2_gene38232 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 5379799-5380298 Trifolium pratense
Tp57577_TGAC_v2_gene38232 0.5kb downstream 0.5kb downstream 19356 true Tp57577_TGAC_v2_LG7: 5360443-5379798 Trifolium pratense
Tp57577_TGAC_v2_gene38232 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 5360443-5360942 Trifolium pratense
Tp57577_TGAC_v2_gene38232 1.0kb upstream 1.0kb upstream 19856 true Tp57577_TGAC_v2_LG7: 5360943-5380798 Trifolium pratense
Tp57577_TGAC_v2_gene38232 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 5379799-5380798 Trifolium pratense
Tp57577_TGAC_v2_gene38232 1.0kb downstream 1.0kb downstream 19856 true Tp57577_TGAC_v2_LG7: 5359943-5379798 Trifolium pratense
Tp57577_TGAC_v2_gene38232 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 5359943-5360942 Trifolium pratense
Tp57577_TGAC_v2_gene38232 2.0kb upstream 2.0kb upstream 20856 true Tp57577_TGAC_v2_LG7: 5360943-5381798 Trifolium pratense
Tp57577_TGAC_v2_gene38232 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 5379799-5381798 Trifolium pratense
Tp57577_TGAC_v2_gene38232 2.0kb downstream 2.0kb downstream 20856 true Tp57577_TGAC_v2_LG7: 5358943-5379798 Trifolium pratense
Tp57577_TGAC_v2_gene38232 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 5358943-5360942 Trifolium pratense
Tp57577_TGAC_v2_gene38232 5.0kb upstream 5.0kb upstream 23856 true Tp57577_TGAC_v2_LG7: 5360943-5384798 Trifolium pratense
Tp57577_TGAC_v2_gene38232 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 5379799-5384798 Trifolium pratense
Tp57577_TGAC_v2_gene38232 5.0kb downstream 5.0kb downstream 23856 true Tp57577_TGAC_v2_LG7: 5355943-5379798 Trifolium pratense
Tp57577_TGAC_v2_gene38232 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 5355943-5360942 Trifolium pratense
Tp57577_TGAC_v2_gene38232 10.0kb upstream 10.0kb upstream 28856 true Tp57577_TGAC_v2_LG7: 5360943-5389798 Trifolium pratense
Tp57577_TGAC_v2_gene38232 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 5379799-5389798 Trifolium pratense
Tp57577_TGAC_v2_gene38232 10.0kb downstream 10.0kb downstream 28856 true Tp57577_TGAC_v2_LG7: 5350943-5379798 Trifolium pratense
Tp57577_TGAC_v2_gene38232 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 5350943-5360942 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302952 5265 Fabidae View MSA
124067399 5270 Rosid View MSA
123753673 5271 Pentapetalae View MSA
122789670 5272 Eudicot View MSA
122046398 5273 Angiosperm View MSA
121350852 5274 Embryophyte View MSA
123425493 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain