Gene : Tp57577_TGAC_v2_gene19888 T. pratense v2
Defline:  (1 of 2) PTHR35698:SF1 - DNA-BINDING PROTEIN RHL1 Genomic Order:  2296
Name:  ? Tp57577_TGAC_v2_gene19888 Secondary Identifier:  ? PAC:35957905
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene19888 0.5kb upstream 0.5kb upstream 6042 true Tp57577_TGAC_v2_LG7: 19960706-19966747 Trifolium pratense
Tp57577_TGAC_v2_gene19888 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 19966248-19966747 Trifolium pratense
Tp57577_TGAC_v2_gene19888 0.5kb downstream 0.5kb downstream 6042 true Tp57577_TGAC_v2_LG7: 19960206-19966247 Trifolium pratense
Tp57577_TGAC_v2_gene19888 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 19960206-19960705 Trifolium pratense
Tp57577_TGAC_v2_gene19888 1.0kb upstream 1.0kb upstream 6542 true Tp57577_TGAC_v2_LG7: 19960706-19967247 Trifolium pratense
Tp57577_TGAC_v2_gene19888 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 19966248-19967247 Trifolium pratense
Tp57577_TGAC_v2_gene19888 1.0kb downstream 1.0kb downstream 6542 true Tp57577_TGAC_v2_LG7: 19959706-19966247 Trifolium pratense
Tp57577_TGAC_v2_gene19888 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 19959706-19960705 Trifolium pratense
Tp57577_TGAC_v2_gene19888 2.0kb upstream 2.0kb upstream 7542 true Tp57577_TGAC_v2_LG7: 19960706-19968247 Trifolium pratense
Tp57577_TGAC_v2_gene19888 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 19966248-19968247 Trifolium pratense
Tp57577_TGAC_v2_gene19888 2.0kb downstream 2.0kb downstream 7542 true Tp57577_TGAC_v2_LG7: 19958706-19966247 Trifolium pratense
Tp57577_TGAC_v2_gene19888 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 19958706-19960705 Trifolium pratense
Tp57577_TGAC_v2_gene19888 5.0kb upstream 5.0kb upstream 10542 true Tp57577_TGAC_v2_LG7: 19960706-19971247 Trifolium pratense
Tp57577_TGAC_v2_gene19888 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 19966248-19971247 Trifolium pratense
Tp57577_TGAC_v2_gene19888 5.0kb downstream 5.0kb downstream 10542 true Tp57577_TGAC_v2_LG7: 19955706-19966247 Trifolium pratense
Tp57577_TGAC_v2_gene19888 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 19955706-19960705 Trifolium pratense
Tp57577_TGAC_v2_gene19888 10.0kb upstream 10.0kb upstream 15542 true Tp57577_TGAC_v2_LG7: 19960706-19976247 Trifolium pratense
Tp57577_TGAC_v2_gene19888 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 19966248-19976247 Trifolium pratense
Tp57577_TGAC_v2_gene19888 10.0kb downstream 10.0kb downstream 15542 true Tp57577_TGAC_v2_LG7: 19950706-19966247 Trifolium pratense
Tp57577_TGAC_v2_gene19888 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 19950706-19960705 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308575 5265 Fabidae View MSA
124061224 5270 Rosid View MSA
123745931 5271 Pentapetalae View MSA
122792650 5272 Eudicot View MSA
122048077 5273 Angiosperm View MSA
121344975 5274 Embryophyte View MSA
123426028 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain