Protein Domain : IPR028974

Type:  Repeat Name:  TSP type-3 repeat
Description:  This entry represents the calcium-binding type 3 (T3) repeats found in extracellular calcium-binding multifunctional proteins, thrombospondins (TSPs). The T3 repeats lack secondary structure and are organised around a core of calcium ions; two DxDxDGxxDxxD motifs per repeat each encapsulate two calcium ions in a novel arrangement []. TSP type-3 repeat can be found in the following proteins: Cartilage oligomeric matrix protein: may play a role in the structural integrity of cartilage via its interaction with other extracellular matrix proteins such as the collagens and fibronectin [].Outer membrane porin F from bacteria []. Alpha-agarase: hydrolyses agarose, agarohexaose, neoagarohexaose and porphyran [, ]. Short Name:  TSP_type-3_rpt

0 Child Features

0 Contains

2 Cross Referencess

Identifier
G3DSA:4.10.1080.10
SSF103647

0 Found In

1 GO Annotation

GO Term Gene Name
GO:0005509 IPR028974

1 Ontology Annotations

GO Term Gene Name
GO:0005509 IPR028974

0 Parent Features

150 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
evm.model.supercontig_76.59 PAC:16426029 Carica papaya 981  
orange1.1g028872m A0A067G2G0 PAC:18125951 Citrus sinensis 202  
Thhalv10018294m V4KJE2 PAC:20191948 Eutrema salsugineum 612  
Thhalv10018295m V4KJE2 PAC:20191947 Eutrema salsugineum 612  
Ciclev10009511m V4UIX5 PAC:20794754 Citrus clementina 205  
Migut.L00885.1.p A0A022PUY8 PAC:28934551 Mimulus guttatus 164  
Cre12.g491200.t1.1 A0A2K3D237 PAC:30793155 Chlamydomonas reinhardtii 399  
Cre13.g604250.t1.1 A0A2K3D1C4 PAC:30784166 Chlamydomonas reinhardtii 1801  
Cre05.g244701.t1.1 A0A2K3DS92 PAC:30783311 Chlamydomonas reinhardtii 2762  
Medtr5g033450.1 G7JZ09 PAC:31086524 Medicago truncatula 305  
evm_27.model.AmTr_v1.0_scaffold00129.17 W1NL73 PAC:31551585 Amborella trichopoda 705  
Traes_2DS_B8DAE16C8.10 PAC:31785620 Triticum aestivum 122  
Traes_4DL_A50F6517F.1 PAC:31859881 Triticum aestivum 86  
Eucgr.A02770.1.p A0A059DJX9 PAC:32048279 Eucalyptus grandis 309  
Sphfalx0126s0054.1.p PAC:32613664 Sphagnum fallax 504  
Sevir.4G118200.1.p A0A4V6D866 PAC:32646189 Setaria viridis 179  
Brdisv1Per11001991m.p PAC:33230748 Brachypodium distachyon Per1 2569  
Brdisv1Uni21001865m.p PAC:33268866 Brachypodium distachyon Uni2 2569  
Brdisv1Bd3-1_r1001681m.p PAC:33313003 Brachypodium distachyon Bd3-1 2569  
Brdisv1BdTR7a1002075m.p PAC:33345691 Brachypodium distachyon BdTR7a 2570  
Brdisv1Koz-11002021m.p PAC:33400301 Brachypodium distachyon Koz-1 2569  
Brdisv20Bd21Ref1002139m.p PAC:33444666 Brachypodium distachyon Bd21 AnntCtrl 2570  
Brdisv1Tek-41035980m.p PAC:33484560 Brachypodium distachyon Tek-4 132  
Brdisv1ABR9_r1001996m.p PAC:33527327 Brachypodium distachyon ABR9 2570  
Brdisv1BdTR13a1001970m.p PAC:33568511 Brachypodium distachyon BdTR13a 2569  
Brdisv1pangenome1015456m.p PAC:33645301 Brachypodium distachyon Pangenome 2570  
Brdisv1ABR6_r1002000m.p PAC:33675186 Brachypodium distachyon ABR6 2569  
Brdisv1ABR21002023m.p PAC:33735064 Brachypodium distachyon ABR2 2570  
Brdisv1S8iiC1001971m.p PAC:33856057 Brachypodium distachyon S8iic 2569  
Brdisv1Tek-21001854m.p PAC:33897379 Brachypodium distachyon Tek-2 2570  

5 Publications

First Author Title Year Journal Volume Pages PubMed ID
            15014436
            16051604
            17177517
            23056489
            17513582