Protein Domain : IPR017984

Type:  Domain Name:  Chromo domain subgroup
Description:  The CHROMO (CHRromatin Organization MOdifier) domain [, , , ] is a conserved region of around 60 amino acids, originally identified in Drosophila modifiers of variegation. These are proteins that alter the structure of chromatin to the condensed morphology of heterochromatin, a cytologically visible condition where gene expression is repressed. In one of these proteins, Polycomb, the chromo domain has been shown to be important for chromatin targeting. Proteins that contain a chromo domain appear to fall into 3 classes. The first class includes proteins having an N-terminal chromo domain followed by a region termed the chromo shadow domain [], eg. Drosophila and human heterochromatin protein Su(var)205 (HP1). The second class includes proteins with a single chromo domain, eg. Drosophila protein Polycomb (Pc); mammalian modifier 3; human Mi-2 autoantigenand and several yeast and Caenorhabditis eleganshypothetical proteins. In the third class paired tandem chromo domains are found, eg. in mammalian DNA-binding/helicase proteins CHD-1 to CHD-4 and yeast protein CHD1.This entry represents a subgroup of the Chromo domain Short Name:  Chromo_dom_subgr

0 Child Features

0 Contains

1 Cross References

Identifier
PR00504

0 Found In

0 GO Annotation

0 Ontology Annotations

1 Parent Features

DB identifier Type Name
IPR023780 Domain Chromo domain

558 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
evm.model.supercontig_73.30 PAC:16425608 Carica papaya 443  
30148.m001410 B9SDA2 PAC:16820556 Ricinus communis 462  
Cucsa.362610.1 A0A0A0KBN0 PAC:16980951 Cucumis sativus 454  
Cucsa.362610.2 A0A0A0KBN0 PAC:16980952 Cucumis sativus 454  
Cucsa.362610.4 PAC:16980954 Cucumis sativus 424  
Cucsa.257460.1 A0A0A0L6G7 PAC:16972710 Cucumis sativus 409  
orange1.1g042818m A0A067E6A6 PAC:18110911 Citrus sinensis 440  
AT5G17690.1 Q946J8 PAC:19668792 Arabidopsis thaliana 445  
AT1G80740.1 O49139 PAC:19657552 Arabidopsis thaliana 791  
Thhalv10013571m V4LDI2 PAC:20205912 Eutrema salsugineum 439  
Ciclev10031549m V4TBD1 PAC:20803167 Citrus clementina 441  
Ciclev10032035m V4TL75 PAC:20803168 Citrus clementina 338  
Lus10001338 PAC:23146553 Linum usitatissimum 470  
Lus10013641 PAC:23171592 Linum usitatissimum 412  
Potri.019G044400.1 A0A2K1WPJ7 PAC:27025768 Populus trichocarpa 529  
Potri.013G070400.1 PAC:26994445 Populus trichocarpa 511  
Gorai.007G347200.1 A0A0D2PJ29 PAC:26779144 Gossypium raimondii 436  
Thecc1EG025743t2 A0A061F0E3 PAC:27423921 Theobroma cacao 435  
Thecc1EG025743t1 A0A061F107 PAC:27423922 Theobroma cacao 430  
Migut.N01648.1.p A0A022RP26 PAC:28925728 Mimulus guttatus 443  
Migut.O00699.1.p PAC:28938627 Mimulus guttatus 224  
Araha.7904s0020.1.p PAC:28860253 Arabidopsis halleri 439  
Cagra.6254s0015.1.p PAC:28897592 Capsella grandiflora 455  
Glyma.16G079900.1.p A0A0R0FVG1 PAC:30560616 Glycine max 448  
Glyma.03G111600.1.p K7KED5 PAC:30516240 Glycine max 285  
Glyma.04G002100.1.p I1JSC2 PAC:30489595 Glycine max 296  
Brara.B00724.1.p A0A398AD31 PAC:30610452 Brassica rapa FPsc 378  
Brara.C00778.1.p A0A397ZT03 PAC:30615696 Brassica rapa FPsc 324  
Brara.J01786.1.p A0A397XLE8 PAC:30613876 Brassica rapa FPsc 435  
Bostr.26527s0439.1.p PAC:30654218 Boechera stricta 441  

4 Publications

First Author Title Year Journal Volume Pages PubMed ID
            1708124
            7667093
            7501439
            1982376