Protein Domain : IPR001895

Type:  Domain Name:  Ras guanine-nucleotide exchange factors catalytic domain
Description:  Ras proteins are membrane-associated molecular switches that bind GTP and GDP and slowly hydrolyze GTP to GDP []. The balance between the GTP bound (active) and GDP bound (inactive) states is regulated by the opposite action of proteins activating the GTPase activity and that of proteins which promote the loss of bound GDP and the uptake of fresh GTP [, ]. The latter proteinsare known as guanine-nucleotide exchange (or releasing) factors (GEFs or GRFs) (or also as guanine-nucleotide dissociation stimulators (GDSs)).The crystal structure of the GEF region of human Sos1 complexes with Ras has been solved []. The structure consists of two distinct alphahelical structural domains: the N-terminal domain which seems to have a purely structural role and the C-terminal domain which is sufficient for catalyticactivity and contains all residues that interact with Ras. A main feature of the catalytic domain is the protrusion of a helical hairpin important for thenucleotide-exchange mechanism. The N-terminal domain is likely to be important for the stability and correct placement of the hairpin structure.Some proteins known to contain a Ras-GEF domain are listed below:Cdc25 from yeast.Scd25 from yeast.Ste6 from fission yeast.Son of sevenless (gene sos) from Drosophila and mammals.p140-RAS GRF (cdc25Mm) from mammals. This protein possesses both a domain belonging to the CDC25 family and one belonging to the CDC24 family.Bud5 from yeast, that may interact with the ras-like protein RSR1/BUD1.Lte1 from yeast, whose target protein is not yet known.ralGDS from mammals, which interacts with the ras-like proteins ralA and ralB [].This entry represents the catalytic domain of the Ras guanine-nucleotide exchange factors. Short Name:  RASGEF_cat_dom

0 Child Features

1 Contains

DB identifier Type Name
IPR019804 Conserved_site Ras guanine-nucleotide exchange factor, conserved site

4 Cross Referencess

Identifier
PF00617
PS50009
SM00147
G3DSA:1.10.840.10

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0005085 IPR001895
GO:0007264 IPR001895

2 Ontology Annotations

GO Term Gene Name
GO:0005085 IPR001895
GO:0007264 IPR001895

0 Parent Features

35 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
evm.model.supercontig_71.2 PAC:16425426 Carica papaya 73  
Thhalv10022185m V4LAT6 PAC:20182310 Eutrema salsugineum 204  
46709 I0Z457 PAC:27389968 Coccomyxa subellipsoidea C-169 391  
Glyma.13G335300.1.p I1M4V9 PAC:30500700 Glycine max 451  
Glyma.13G335300.2.p I1M4W0 PAC:30500701 Glycine max 444  
Traes_4AL_03689A52A.5 PAC:31859411 Triticum aestivum 451  
GSMUA_Achr9P11120_001 PAC:32307075 Musa acuminata 789  
Pp3c7_3400V3.1.p A0A2K1KA68 PAC:32924718 Physcomitrium patens 320  
Brdisv1Tek-41002633m.p PAC:33481205 Brachypodium distachyon Tek-4 192  
DCAR_018262 PAC:36077578 Daucus carota 629  
Solyc02g014500.1.1 PAC:36156705 Solanum lycopersicum 154  
AUR62035153-RA PAC:36316680 Chenopodium quinoa 280  
Pavir.7KG041300.1.p PAC:37687652 Panicum virgatum 179  
Pavir.8NG247500.1.p PAC:37623965 Panicum virgatum 322  
AH003900-RA PAC:38182923 Amaranthus hypochondriacus 601  
Caamp.0015s0194.1.p PAC:39104508 Caulanthus amplexicaulis 895  
Alyli.0151s0004.1.p PAC:39156535 Alyssum linifolium 1045  
Alyli.0025s0160.1.p PAC:39154951 Alyssum linifolium 1045  
Thlar.0146s0096.1.p PAC:39521547 Thlaspi arvense 528  
Thlar.0502s0001.1.p PAC:39512596 Thlaspi arvense 430  
Desop.0228s0424.1.p PAC:39657545 Descurainia sophioides 1047  
Stapi.2605s0004.1.p PAC:39863829 Stanleya pinnata 245  
Eruve.0461s0019.1.p PAC:39951499 Eruca vesicaria 123  
Eruve.2322s0005.1.p PAC:39953891 Eruca vesicaria 94  
Glyma.13G335300.2.p I1M4W0 PAC:41139417 Glycine max 444  
Glyma.13G335300.1.p I1M4V9 PAC:41139416 Glycine max 451  
GlysoPI483463.13G284600.1.p A0A445IDR9 PAC:41192964 Glycine soja 444  
GlymaLee.13G292200.1.p I1M4W0 PAC:41247549 Glycine max Lee 444  
BdiBd30-1.4G0311500.1.p PAC:41501259 Brachypodium distachyon Bd30-1 113  
Manes.16G026600.3.p A0A2C9U8C5 PAC:41856851 Manihot esculenta 491  

4 Publications

First Author Title Year Journal Volume Pages PubMed ID
            15335949
            1898771
            8259209
            8094051