Gene : AL6G28300 A. lyrata v2.1

Defline:  (1 of 1) K05288 - phosphatidylinositol glycan, class O (PIGO) Genomic Order:  1730
Name:  ? AL6G28300 Secondary Identifier:  ? PAC:35926765

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G28300 0.5kb upstream 0.5kb upstream 6465   true scaffold_6: 7081253-7087717 Arabidopsis lyrata
AL6G28300 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 7087218-7087717 Arabidopsis lyrata
AL6G28300 0.5kb downstream 0.5kb downstream 6465   true scaffold_6: 7080753-7087217 Arabidopsis lyrata
AL6G28300 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 7080753-7081252 Arabidopsis lyrata
AL6G28300 1.0kb upstream 1.0kb upstream 6965   true scaffold_6: 7081253-7088217 Arabidopsis lyrata
AL6G28300 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 7087218-7088217 Arabidopsis lyrata
AL6G28300 1.0kb downstream 1.0kb downstream 6965   true scaffold_6: 7080253-7087217 Arabidopsis lyrata
AL6G28300 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 7080253-7081252 Arabidopsis lyrata
AL6G28300 2.0kb upstream 2.0kb upstream 7965   true scaffold_6: 7081253-7089217 Arabidopsis lyrata
AL6G28300 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 7087218-7089217 Arabidopsis lyrata
AL6G28300 2.0kb downstream 2.0kb downstream 7965   true scaffold_6: 7079253-7087217 Arabidopsis lyrata
AL6G28300 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 7079253-7081252 Arabidopsis lyrata
AL6G28300 5.0kb upstream 5.0kb upstream 10965   true scaffold_6: 7081253-7092217 Arabidopsis lyrata
AL6G28300 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 7087218-7092217 Arabidopsis lyrata
AL6G28300 5.0kb downstream 5.0kb downstream 10965   true scaffold_6: 7076253-7087217 Arabidopsis lyrata
AL6G28300 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 7076253-7081252 Arabidopsis lyrata
AL6G28300 10.0kb upstream 10.0kb upstream 15965   true scaffold_6: 7081253-7097217 Arabidopsis lyrata
AL6G28300 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 7087218-7097217 Arabidopsis lyrata
AL6G28300 10.0kb downstream 10.0kb downstream 15965   true scaffold_6: 7071253-7087217 Arabidopsis lyrata
AL6G28300 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 7071253-7081252 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360962 5261 Brassicaceae View MSA
123832588 5264 Brassicales-Malvales View MSA
124340757 5266 SBM View MSA
124240987 5268 Malvidae View MSA
124060946 5270 Rosid View MSA
123738911 5271 Pentapetalae View MSA
122791946 5272 Eudicot View MSA
122044137 5273 Angiosperm View MSA
121345905 5274 Embryophyte View MSA
123425893 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain