Gene : AL6G22230 A. lyrata v2.1

Defline:  (1 of 1) PTHR21573:SF0 - ER MEMBRANE PROTEIN COMPLEX SUBUNIT 1 Genomic Order:  1153
Name:  ? AL6G22230 Secondary Identifier:  ? PAC:35928140

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G22230 0.5kb upstream 0.5kb upstream 5360   true scaffold_6: 4631903-4637262 Arabidopsis lyrata
AL6G22230 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 4636763-4637262 Arabidopsis lyrata
AL6G22230 0.5kb downstream 0.5kb downstream 5360   true scaffold_6: 4631403-4636762 Arabidopsis lyrata
AL6G22230 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 4631403-4631902 Arabidopsis lyrata
AL6G22230 1.0kb upstream 1.0kb upstream 5860   true scaffold_6: 4631903-4637762 Arabidopsis lyrata
AL6G22230 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 4636763-4637762 Arabidopsis lyrata
AL6G22230 1.0kb downstream 1.0kb downstream 5860   true scaffold_6: 4630903-4636762 Arabidopsis lyrata
AL6G22230 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 4630903-4631902 Arabidopsis lyrata
AL6G22230 2.0kb upstream 2.0kb upstream 6860   true scaffold_6: 4631903-4638762 Arabidopsis lyrata
AL6G22230 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 4636763-4638762 Arabidopsis lyrata
AL6G22230 2.0kb downstream 2.0kb downstream 6860   true scaffold_6: 4629903-4636762 Arabidopsis lyrata
AL6G22230 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 4629903-4631902 Arabidopsis lyrata
AL6G22230 5.0kb upstream 5.0kb upstream 9860   true scaffold_6: 4631903-4641762 Arabidopsis lyrata
AL6G22230 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 4636763-4641762 Arabidopsis lyrata
AL6G22230 5.0kb downstream 5.0kb downstream 9860   true scaffold_6: 4626903-4636762 Arabidopsis lyrata
AL6G22230 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 4626903-4631902 Arabidopsis lyrata
AL6G22230 10.0kb upstream 10.0kb upstream 14860   true scaffold_6: 4631903-4646762 Arabidopsis lyrata
AL6G22230 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 4636763-4646762 Arabidopsis lyrata
AL6G22230 10.0kb downstream 10.0kb downstream 14860   true scaffold_6: 4621903-4636762 Arabidopsis lyrata
AL6G22230 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 4621903-4631902 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365276 5261 Brassicaceae View MSA
123830226 5264 Brassicales-Malvales View MSA
124337395 5266 SBM View MSA
124240617 5268 Malvidae View MSA
124063499 5270 Rosid View MSA
123736612 5271 Pentapetalae View MSA
122785753 5272 Eudicot View MSA
122044335 5273 Angiosperm View MSA
121345434 5274 Embryophyte View MSA
123428246 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain