Gene : AL6G16980 A. lyrata v2.1
Defline:  (1 of 4) PTHR27000:SF136 - POLYGALACTURONASE INHIBITOR 1-RELATED Genomic Order:  659
Name:  ? AL6G16980 Secondary Identifier:  ? PAC:35928845
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G16980 0.5kb upstream 0.5kb upstream 1955   true scaffold_6: 2613053-2615007 Arabidopsis lyrata
AL6G16980 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 2613053-2613552 Arabidopsis lyrata
AL6G16980 0.5kb downstream 0.5kb downstream 1955   true scaffold_6: 2613553-2615507 Arabidopsis lyrata
AL6G16980 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 2615008-2615507 Arabidopsis lyrata
AL6G16980 1.0kb upstream 1.0kb upstream 2455   true scaffold_6: 2612553-2615007 Arabidopsis lyrata
AL6G16980 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 2612553-2613552 Arabidopsis lyrata
AL6G16980 1.0kb downstream 1.0kb downstream 2455   true scaffold_6: 2613553-2616007 Arabidopsis lyrata
AL6G16980 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 2615008-2616007 Arabidopsis lyrata
AL6G16980 2.0kb upstream 2.0kb upstream 3455   true scaffold_6: 2611553-2615007 Arabidopsis lyrata
AL6G16980 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 2611553-2613552 Arabidopsis lyrata
AL6G16980 2.0kb downstream 2.0kb downstream 3455   true scaffold_6: 2613553-2617007 Arabidopsis lyrata
AL6G16980 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 2615008-2617007 Arabidopsis lyrata
AL6G16980 5.0kb upstream 5.0kb upstream 6455   true scaffold_6: 2608553-2615007 Arabidopsis lyrata
AL6G16980 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 2608553-2613552 Arabidopsis lyrata
AL6G16980 5.0kb downstream 5.0kb downstream 6455   true scaffold_6: 2613553-2620007 Arabidopsis lyrata
AL6G16980 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 2615008-2620007 Arabidopsis lyrata
AL6G16980 10.0kb upstream 10.0kb upstream 11455   true scaffold_6: 2603553-2615007 Arabidopsis lyrata
AL6G16980 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 2603553-2613552 Arabidopsis lyrata
AL6G16980 10.0kb downstream 10.0kb downstream 11455   true scaffold_6: 2613553-2625007 Arabidopsis lyrata
AL6G16980 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 2615008-2625007 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375065 5261 Brassicaceae View MSA
123838637 5264 Brassicales-Malvales View MSA
124337599 5266 SBM View MSA
124251810 5268 Malvidae View MSA
124063977 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain