Gene : AL5G38530 A. lyrata v2.1

Defline:  (1 of 1) 4.4.1.8 - Cystathionine beta-lyase / Cystine lyase Genomic Order:  2544
Name:  ? AL5G38530 Secondary Identifier:  ? PAC:35919619

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6936 Arabidopsis lyrata pathologic  
Alyrata PWY-702 Arabidopsis lyrata pathologic  
Alyrata PWY-724 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G38530 0.5kb upstream 0.5kb upstream 3342   true scaffold_5: 18218045-18221386 Arabidopsis lyrata
AL5G38530 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 18220887-18221386 Arabidopsis lyrata
AL5G38530 0.5kb downstream 0.5kb downstream 3342   true scaffold_5: 18217545-18220886 Arabidopsis lyrata
AL5G38530 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 18217545-18218044 Arabidopsis lyrata
AL5G38530 1.0kb upstream 1.0kb upstream 3842   true scaffold_5: 18218045-18221886 Arabidopsis lyrata
AL5G38530 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 18220887-18221886 Arabidopsis lyrata
AL5G38530 1.0kb downstream 1.0kb downstream 3842   true scaffold_5: 18217045-18220886 Arabidopsis lyrata
AL5G38530 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 18217045-18218044 Arabidopsis lyrata
AL5G38530 2.0kb upstream 2.0kb upstream 4842   true scaffold_5: 18218045-18222886 Arabidopsis lyrata
AL5G38530 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 18220887-18222886 Arabidopsis lyrata
AL5G38530 2.0kb downstream 2.0kb downstream 4842   true scaffold_5: 18216045-18220886 Arabidopsis lyrata
AL5G38530 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 18216045-18218044 Arabidopsis lyrata
AL5G38530 5.0kb upstream 5.0kb upstream 7842   true scaffold_5: 18218045-18225886 Arabidopsis lyrata
AL5G38530 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 18220887-18225886 Arabidopsis lyrata
AL5G38530 5.0kb downstream 5.0kb downstream 7842   true scaffold_5: 18213045-18220886 Arabidopsis lyrata
AL5G38530 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 18213045-18218044 Arabidopsis lyrata
AL5G38530 10.0kb upstream 10.0kb upstream 12842   true scaffold_5: 18218045-18230886 Arabidopsis lyrata
AL5G38530 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 18220887-18230886 Arabidopsis lyrata
AL5G38530 10.0kb downstream 10.0kb downstream 12842   true scaffold_5: 18208045-18220886 Arabidopsis lyrata
AL5G38530 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 18208045-18218044 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041211 5273 Angiosperm View MSA
122376873 5261 Brassicaceae View MSA
123832648 5264 Brassicales-Malvales View MSA
124345273 5266 SBM View MSA
124239885 5268 Malvidae View MSA
124062752 5270 Rosid View MSA
123751787 5271 Pentapetalae View MSA
122792966 5272 Eudicot View MSA
121349443 5274 Embryophyte View MSA
123424610 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain