Gene : AL4G33060 A. lyrata v2.1

Defline:  (1 of 1) PTHR12741:SF5 - CALLOSE SYNTHASE 10 Genomic Order:  2018
Name:  ? AL4G33060 Secondary Identifier:  ? PAC:35923634

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6773 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G33060 0.5kb upstream 0.5kb upstream 15855   true scaffold_4: 17517346-17533200 Arabidopsis lyrata
AL4G33060 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 17532701-17533200 Arabidopsis lyrata
AL4G33060 0.5kb downstream 0.5kb downstream 15855   true scaffold_4: 17516846-17532700 Arabidopsis lyrata
AL4G33060 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 17516846-17517345 Arabidopsis lyrata
AL4G33060 1.0kb upstream 1.0kb upstream 16355   true scaffold_4: 17517346-17533700 Arabidopsis lyrata
AL4G33060 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 17532701-17533700 Arabidopsis lyrata
AL4G33060 1.0kb downstream 1.0kb downstream 16355   true scaffold_4: 17516346-17532700 Arabidopsis lyrata
AL4G33060 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 17516346-17517345 Arabidopsis lyrata
AL4G33060 2.0kb upstream 2.0kb upstream 17355   true scaffold_4: 17517346-17534700 Arabidopsis lyrata
AL4G33060 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 17532701-17534700 Arabidopsis lyrata
AL4G33060 2.0kb downstream 2.0kb downstream 17355   true scaffold_4: 17515346-17532700 Arabidopsis lyrata
AL4G33060 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 17515346-17517345 Arabidopsis lyrata
AL4G33060 5.0kb upstream 5.0kb upstream 20355   true scaffold_4: 17517346-17537700 Arabidopsis lyrata
AL4G33060 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 17532701-17537700 Arabidopsis lyrata
AL4G33060 5.0kb downstream 5.0kb downstream 20355   true scaffold_4: 17512346-17532700 Arabidopsis lyrata
AL4G33060 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 17512346-17517345 Arabidopsis lyrata
AL4G33060 10.0kb upstream 10.0kb upstream 25355   true scaffold_4: 17517346-17542700 Arabidopsis lyrata
AL4G33060 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 17532701-17542700 Arabidopsis lyrata
AL4G33060 10.0kb downstream 10.0kb downstream 25355   true scaffold_4: 17507346-17532700 Arabidopsis lyrata
AL4G33060 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 17507346-17517345 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366913 5261 Brassicaceae View MSA
123828682 5264 Brassicales-Malvales View MSA
124350687 5266 SBM View MSA
124241987 5268 Malvidae View MSA
124064291 5270 Rosid View MSA
123749286 5271 Pentapetalae View MSA
122796440 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain