Gene : AL1G63530 A. lyrata v2.1

Defline:  (1 of 2) K00167 - 2-oxoisovalerate dehydrogenase E1 component beta subunit (BCKDHB, bkdA2) Genomic Order:  4906
Name:  ? AL1G63530 Secondary Identifier:  ? PAC:35931059

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5046 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G63530 0.5kb upstream 0.5kb upstream 3005   true scaffold_1: 29329889-29332893 Arabidopsis lyrata
AL1G63530 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 29329889-29330388 Arabidopsis lyrata
AL1G63530 0.5kb downstream 0.5kb downstream 3005   true scaffold_1: 29330389-29333393 Arabidopsis lyrata
AL1G63530 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 29332894-29333393 Arabidopsis lyrata
AL1G63530 1.0kb upstream 1.0kb upstream 3505   true scaffold_1: 29329389-29332893 Arabidopsis lyrata
AL1G63530 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 29329389-29330388 Arabidopsis lyrata
AL1G63530 1.0kb downstream 1.0kb downstream 3505   true scaffold_1: 29330389-29333893 Arabidopsis lyrata
AL1G63530 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 29332894-29333893 Arabidopsis lyrata
AL1G63530 2.0kb upstream 2.0kb upstream 4505   true scaffold_1: 29328389-29332893 Arabidopsis lyrata
AL1G63530 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 29328389-29330388 Arabidopsis lyrata
AL1G63530 2.0kb downstream 2.0kb downstream 4505   true scaffold_1: 29330389-29334893 Arabidopsis lyrata
AL1G63530 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 29332894-29334893 Arabidopsis lyrata
AL1G63530 5.0kb upstream 5.0kb upstream 7505   true scaffold_1: 29325389-29332893 Arabidopsis lyrata
AL1G63530 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 29325389-29330388 Arabidopsis lyrata
AL1G63530 5.0kb downstream 5.0kb downstream 7505   true scaffold_1: 29330389-29337893 Arabidopsis lyrata
AL1G63530 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 29332894-29337893 Arabidopsis lyrata
AL1G63530 10.0kb upstream 10.0kb upstream 12505   true scaffold_1: 29320389-29332893 Arabidopsis lyrata
AL1G63530 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 29320389-29330388 Arabidopsis lyrata
AL1G63530 10.0kb downstream 10.0kb downstream 12505   true scaffold_1: 29330389-29342893 Arabidopsis lyrata
AL1G63530 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 29332894-29342893 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377784 5261 Brassicaceae View MSA
123830123 5264 Brassicales-Malvales View MSA
124341245 5266 SBM View MSA
124243640 5268 Malvidae View MSA
124067270 5270 Rosid View MSA
123743874 5271 Pentapetalae View MSA
122787684 5272 Eudicot View MSA
122046166 5273 Angiosperm View MSA
121344271 5274 Embryophyte View MSA
123424966 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain