Gene : estExt_Genemark1.C_140008 C. subellipsoidea C-169 v2.0
Defline:  (1 of 1) PTHR11777:SF18 - ALANINE--TRNA LIGASE, CYTOPLASMIC Genomic Order:  10
Name:  ? estExt_Genemark1.C_140008 Secondary Identifier:  ? PAC:27388115
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
CsubellipsoideaC-169 TRNA-CHARGING-PWY Coccomyxa subellipsoidea C-169 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
estExt_Genemark1.C_140008 0.5kb upstream 0.5kb upstream 10996 true scaffold_14: 39725-50720 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140008 0.5kb upstream 0.5kb upstream 500 false scaffold_14: 39725-40224 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140008 0.5kb downstream 0.5kb downstream 10996 true scaffold_14: 40225-51220 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140008 0.5kb downstream 0.5kb downstream 500 false scaffold_14: 50721-51220 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140008 1.0kb upstream 1.0kb upstream 11496 true scaffold_14: 39225-50720 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140008 1.0kb upstream 1.0kb upstream 1000 false scaffold_14: 39225-40224 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140008 1.0kb downstream 1.0kb downstream 11496 true scaffold_14: 40225-51720 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140008 1.0kb downstream 1.0kb downstream 1000 false scaffold_14: 50721-51720 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140008 2.0kb upstream 2.0kb upstream 12496 true scaffold_14: 38225-50720 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140008 2.0kb upstream 2.0kb upstream 2000 false scaffold_14: 38225-40224 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140008 2.0kb downstream 2.0kb downstream 12496 true scaffold_14: 40225-52720 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140008 2.0kb downstream 2.0kb downstream 2000 false scaffold_14: 50721-52720 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140008 5.0kb upstream 5.0kb upstream 15496 true scaffold_14: 35225-50720 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140008 5.0kb upstream 5.0kb upstream 5000 false scaffold_14: 35225-40224 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140008 5.0kb downstream 5.0kb downstream 15496 true scaffold_14: 40225-55720 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140008 5.0kb downstream 5.0kb downstream 5000 false scaffold_14: 50721-55720 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140008 10.0kb upstream 10.0kb upstream 20496 true scaffold_14: 30225-50720 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140008 10.0kb upstream 10.0kb upstream 10000 false scaffold_14: 30225-40224 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140008 10.0kb downstream 10.0kb downstream 20496 true scaffold_14: 40225-60720 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_140008 10.0kb downstream 10.0kb downstream 10000 false scaffold_14: 50721-60720 Coccomyxa subellipsoidea C-169

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110349 5260 Chlorophyte View MSA
123424131 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier