Gene : Kaladp0031s0042 K. fedtschenkoi v1.1
Defline:  (1 of 1) PTHR32098:SF5 - LYCOPENE BETA/EPSILON CYCLASE PROTEIN Genomic Order:  42
Name:  ? Kaladp0031s0042 Secondary Identifier:  ? PAC:35744228
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Kfedtschenkoi CAROTENOID-PWY Kalanchoe fedtschenkoi pathologic  
Kfedtschenkoi PWY-5943 Kalanchoe fedtschenkoi pathologic  
Kfedtschenkoi PWY-5947 Kalanchoe fedtschenkoi pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Kaladp0031s0042 0.5kb upstream 0.5kb upstream 8580 true Scaffold_31: 396057-404636 Kalanchoe fedtschenkoi
Kaladp0031s0042 0.5kb upstream 0.5kb upstream 500 false Scaffold_31: 404137-404636 Kalanchoe fedtschenkoi
Kaladp0031s0042 0.5kb downstream 0.5kb downstream 8580 true Scaffold_31: 395557-404136 Kalanchoe fedtschenkoi
Kaladp0031s0042 0.5kb downstream 0.5kb downstream 500 false Scaffold_31: 395557-396056 Kalanchoe fedtschenkoi
Kaladp0031s0042 1.0kb upstream 1.0kb upstream 9080 true Scaffold_31: 396057-405136 Kalanchoe fedtschenkoi
Kaladp0031s0042 1.0kb upstream 1.0kb upstream 1000 false Scaffold_31: 404137-405136 Kalanchoe fedtschenkoi
Kaladp0031s0042 1.0kb downstream 1.0kb downstream 9080 true Scaffold_31: 395057-404136 Kalanchoe fedtschenkoi
Kaladp0031s0042 1.0kb downstream 1.0kb downstream 1000 false Scaffold_31: 395057-396056 Kalanchoe fedtschenkoi
Kaladp0031s0042 2.0kb upstream 2.0kb upstream 10080 true Scaffold_31: 396057-406136 Kalanchoe fedtschenkoi
Kaladp0031s0042 2.0kb upstream 2.0kb upstream 2000 false Scaffold_31: 404137-406136 Kalanchoe fedtschenkoi
Kaladp0031s0042 2.0kb downstream 2.0kb downstream 10080 true Scaffold_31: 394057-404136 Kalanchoe fedtschenkoi
Kaladp0031s0042 2.0kb downstream 2.0kb downstream 2000 false Scaffold_31: 394057-396056 Kalanchoe fedtschenkoi
Kaladp0031s0042 5.0kb upstream 5.0kb upstream 13080 true Scaffold_31: 396057-409136 Kalanchoe fedtschenkoi
Kaladp0031s0042 5.0kb upstream 5.0kb upstream 5000 false Scaffold_31: 404137-409136 Kalanchoe fedtschenkoi
Kaladp0031s0042 5.0kb downstream 5.0kb downstream 13080 true Scaffold_31: 391057-404136 Kalanchoe fedtschenkoi
Kaladp0031s0042 5.0kb downstream 5.0kb downstream 5000 false Scaffold_31: 391057-396056 Kalanchoe fedtschenkoi
Kaladp0031s0042 10.0kb upstream 10.0kb upstream 18080 true Scaffold_31: 396057-414136 Kalanchoe fedtschenkoi
Kaladp0031s0042 10.0kb upstream 10.0kb upstream 10000 false Scaffold_31: 404137-414136 Kalanchoe fedtschenkoi
Kaladp0031s0042 10.0kb downstream 10.0kb downstream 18080 true Scaffold_31: 386057-404136 Kalanchoe fedtschenkoi
Kaladp0031s0042 10.0kb downstream 10.0kb downstream 10000 false Scaffold_31: 386057-396056 Kalanchoe fedtschenkoi

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123739346 5271 Pentapetalae View MSA
122787287 5272 Eudicot View MSA
122042056 5273 Angiosperm View MSA
121350076 5274 Embryophyte View MSA
123425500 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain