Protein Domain : IPR000436

Type:  Domain Name:  Sushi/SCR/CCP domain
Description:  The extracellular sushi domain is characterised by a consensus sequence spanning ~60 residues containing four invariant cysteine residues forming twodisulfide-bridges (I-III and II-IV), a highly conserved tryptophan, and conserved glycine, proline, and hydrophobic residues []. Sushi domains areknown to be involved in many recognition processes, including the binding of several complement factors to fragments C3b and C4b []. The sushi domain isalso known as the complement controle protein (CCP) module or the short consensus repeat (SCR). Several structure of the sushi domain have been solved (see for example {PDB:1HCC}) []. The sushi domain folds into a small and compact hydrophobiccore enveloped by six beta-strands and stabilised by two disulfide bridges. The relative structural orientation of the Beta-2 and Beta-4 strands is sharedby all the sushi structures, whereas the topology of the other strands relative to this central conserved core is variable, especially at the regionsthat form the interfaces with the preceding and following domains []. Short Name:  Sushi_SCR_CCP_dom

0 Child Features

0 Contains

4 Cross Referencess

Identifier
PF00084
PS50923
SM00032
SSF57535

6 Found Ins

DB identifier Type Name
IPR002396 Family Selectin superfamily
IPR011360 Family Complement B/C2
IPR015486 Family Interleukin-2 receptor alpha
IPR017341 Family Membrane cofactor protein CD46
IPR008292 Family Haptoglobin
IPR011176 Family Complement control protein, vaccinia C3L

0 GO Annotation

0 Ontology Annotations

0 Parent Features

54 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
evm.model.supercontig_3.63 PAC:16416848 Carica papaya 374  
139130 PAC:27342551 Micromonas pusilla CCMP1545 118  
133755 PAC:27342846 Micromonas pusilla CCMP1545 149  
55115 PAC:27343062 Micromonas pusilla CCMP1545 1213  
155556 PAC:27341768 Micromonas pusilla CCMP1545 55  
47301 C1MTE9 PAC:27341859 Micromonas pusilla CCMP1545 7194  
53851 C1FHN3 PAC:27397466 Micromonas sp RCC299 497  
53803 C1FHE4 PAC:27397275 Micromonas sp RCC299 743  
64800 C1EJ44 PAC:27397008 Micromonas sp RCC299 2262  
64757 C1EIZ7 PAC:27397095 Micromonas sp RCC299 720  
64755 C1EIZ5 PAC:27397229 Micromonas sp RCC299 1195  
63797 C1EFI1 PAC:27402556 Micromonas sp RCC299 159  
55583 C1FEV6 PAC:27398958 Micromonas sp RCC299 937  
57699 C1E3J0 PAC:27400757 Micromonas sp RCC299 723  
57684 C1E3H5 PAC:27400180 Micromonas sp RCC299 518  
50157 C1E5I5 PAC:27395287 Micromonas sp RCC299 648  
58413 C1E5S0 PAC:27395824 Micromonas sp RCC299 1164  
Migut.B01865.1.p PAC:28946294 Mimulus guttatus 368  
Medtr4g025560.1 A0A072UH77 PAC:31114988 Medicago truncatula 136  
Eucgr.G01647.1.p A0A059BCZ2 PAC:32071979 Eucalyptus grandis 73  
Bradi2g33886.1.p A0A2K2DBM8 PAC:32771828 Brachypodium distachyon 131  
Dusal.0122s00013.1.p PAC:33203030 Dunaliella salina 852  
Tp57577_TGAC_v2_mRNA3798 PAC:35962020 Trifolium pratense 74  
Pavir.2KG384500.1.p PAC:37564054 Panicum virgatum 104  
Oeu031658.1 PAC:37733565 Olea europaea 60  
BdiBd21-3.2G0421100.1.p A0A2K2DBM8 PAC:38188870 Brachypodium distachyon Bd21-3 131  
HORVU3Hr1G014230.5 PAC:38414295 Hordeum vulgare 192  
HORVU5Hr1G006550.2 PAC:38422958 Hordeum vulgare 86  
Brahy.D02G0441300.1.p PAC:38654111 Brachypodium hybridum 131  
Brahy.S09G0177100.1.p PAC:38639004 Brachypodium hybridum 159  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            1829116
            2751824
            10775260