Protein Domain : IPR010995

Type:  Domain Name:  DNA repair Rad51/transcription factor NusA, alpha-helical
Description:  This entry represents an alpha-helical bundle domain, which has a SAM domain-like fold. This compact domain consists of a 4-5 helical bundle of two orthogonally packed alpha-hairpins, and contains one classic and one pseudo HhH (helix-hairpin-helix) motif. This domain is found at N-terminal of the DNA repair protein Rad51, at the C-terminal of the transcription elongation protein NusA, and at the C-terminal of the hypothetical protein AF1548.Human Rad51 protein is a homologue of Escherichia coliRecA protein, and functions in DNA repair and recombination []. In higher eukaryotes, Rad51 protein is essential for cell viability. The N-terminal region of Rad51 is highly conserved among eukaryotic Rad51 proteins but is absent from RecA, suggesting a Rad51-specific function for this region. The-terminal domain is involved in interactions with DNA and proteins; DNA binding may be regulated via phosphorylation within the N-terminal domain.NusA (N utilisation substance A) from E. coli is an essential transcription factor that associates with the RNA polymerase (RNAP) core enzyme, where it modulates transcriptional pausing, termination and anti-termination []. The C-terminal of NusA consists of two repeat units, and is responsible for the interaction of NisA with the C-terminal of RNAP, and with its interaction with protein N from phage lambda during anti-termination []. Short Name:  DNA_repair_Rad51/TF_NusA_a-hlx

0 Child Features

2 Contains

DB identifier Type Name
IPR003583 Domain Helix-hairpin-helix DNA-binding motif, class 1
IPR010214 Repeat Transcription termination factor NusA, C-terminal duplication

1 Cross References

Identifier
SSF47794

3 Found Ins

DB identifier Type Name
IPR016467 Family DNA recombination and repair protein, RecA-like
IPR011940 Family Meiotic recombinase Dmc1
IPR011938 Family DNA recombination/repair protein RadA

1 GO Annotation

GO Term Gene Name
GO:0000166 IPR010995

1 Ontology Annotations

GO Term Gene Name
GO:0000166 IPR010995

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
evm.model.supercontig_18.103 PAC:16411242 Carica papaya 346  
evm.model.supercontig_344.4 PAC:16418081 Carica papaya 340  
evm.model.supercontig_44.128 PAC:16420133 Carica papaya 333  
29739.m003680 B9RR28 PAC:16807459 Ricinus communis 294  
29844.m003214 B9RTJ3 PAC:16810921 Ricinus communis 353  
40877.m000013 B9TM94 PAC:16827353 Ricinus communis 316  
Cucsa.142090.2 PAC:16963584 Cucumis sativus 304  
Cucsa.142090.1 A0A0A0M2A5 PAC:16963583 Cucumis sativus 340  
Cucsa.254660.1 PAC:16972283 Cucumis sativus 345  
orange1.1g019381m A0A067G2F0 PAC:18125985 Citrus sinensis 342  
orange1.1g047388m A0A067GGE2 PAC:18106035 Citrus sinensis 352  
AT5G20850.1 P94102 PAC:19671792 Arabidopsis thaliana 342  
AT3G22880.1 Q39009 PAC:19663360 Arabidopsis thaliana 344  
AT2G45280.1 Q8GXF0 PAC:19639466 Arabidopsis thaliana 363  
Thhalv10021068m V4LUT8 PAC:20182072 Eutrema salsugineum 344  
Thhalv10014015m V4LQJ6 PAC:20206698 Eutrema salsugineum 342  
Thhalv10001556m V4N252 PAC:20189062 Eutrema salsugineum 317  
Thhalv10001529m V4L687 PAC:20188873 Eutrema salsugineum 344  
Ciclev10021754m V4TDU7 PAC:20811825 Citrus clementina 261  
Ciclev10010591m V4UPG0 PAC:20794483 Citrus clementina 310  
Ciclev10006682m V4S3D1 PAC:20791383 Citrus clementina 352  
Lus10039928 PAC:23173473 Linum usitatissimum 333  
Lus10027654 PAC:23151291 Linum usitatissimum 370  
Lus10006625 PAC:23145311 Linum usitatissimum 348  
Lus10039383 PAC:23175626 Linum usitatissimum 360  
Potri.010G081500.1 PAC:26979739 Populus trichocarpa 353  
Potri.006G135200.1 PAC:27005224 Populus trichocarpa 348  
Potri.006G135200.2 A0A2K2A1W1 PAC:27005225 Populus trichocarpa 342  
Potri.008G158500.1 PAC:27039374 Populus trichocarpa 144  
Potri.008G158500.2 PAC:27039375 Populus trichocarpa 142  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            10390347
            15365170
            15987884