Protein Domain : IPR012128

Type:  Family Name:  Phycobilisome, alpha/beta subunit
Description:  Cyanobacteria and red algae harvest light through water-soluble complexes, called phycobilisomes, which are attached to the outer face of the thylakoid membrane []. These complexes are capable of transferring the absorbed energy to the photosynthetic reaction centre with greater than 95% efficiency. Phycobilisomes contain various photosynthetic light harvesting proteins known as biliproteins, and linker proteins which help assemble the structure. The two main structural elements of the complex are a core located near the photosynthetic reaction centre, and rods attached to this core. Allophycocyanin is the major component of the core, while the rods contain phycocyanins, phycoerythrins and linker proteins. The rod biliproteins harvest photons, with the excitation energy being passed through the rods into the allophycocyanin in the core. Other core biliproteins subsequently pass this energy to chlorophyll within the thylakoid membrane.This entry represents the alpha and beta subunits found in biliproteins from cyanobacteria and red algae. Structural studies indicate that the basic structural unit of most biliproteins is a heterodimer composed of these alpha and beta subunits [, , , ]. The full protein is a ring-like trimer assembly of these heterodimers. Each subunit of the heterodimer has eight helices and binds chromophores through thioester bonds formed at particular cysteine residues. These chromophores, also known as bilins, are open-chain tetrapyrroles whose number and type vary with the particular biliprotein eg R-phyocerythrin binds five phycoerythrobilins per heterodimer, while allophycocyanin binds two phycocyanobilins per heterodimer. Short Name:  Phycobilisome_asu/bsu

3 Child Features

DB identifier Type Name
IPR006245 Family Allophycocyanin, beta subunit
IPR006246 Family Phycocyanin, alpha subunit
IPR006247 Family Phycocyanin, beta subunit

0 Contains

3 Cross Referencess

Identifier
PF00502
PIRSF000081
G3DSA:1.10.490.20

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0015979 IPR012128
GO:0030089 IPR012128

2 Ontology Annotations

GO Term Gene Name
GO:0015979 IPR012128
GO:0030089 IPR012128

0 Parent Features

117 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
evm.model.supercontig_170.11 PAC:16410829 Carica papaya 301  
29815.m000507 B9SRM3 PAC:16809562 Ricinus communis 446  
Thhalv10017837m V4MHK4 PAC:20181218 Eutrema salsugineum 718  
14943 I0Z0N4 PAC:27391218 Coccomyxa subellipsoidea C-169 752  
54327 C1N917 PAC:27344775 Micromonas pusilla CCMP1545 97  
Migut.D01082.1.p A0A022Q9K8 PAC:28927927 Mimulus guttatus 345  
Glyma.05G076900.1.p I1K1Y8 PAC:30525977 Glycine max 129  
Glyma.19G071100.1.p A0A0R0EUW5 PAC:30512693 Glycine max 115  
Traes_6AS_9596E4B58.10 PAC:31741093 Triticum aestivum 179  
Traes_7AS_466B5A9CD.1 PAC:31958280 Triticum aestivum 86  
Prupe.3G114500.2.p A0A251PYX4 PAC:32106358 Prunus persica 457  
Prupe.3G114500.1.p A0A251PYX4 PAC:32106357 Prunus persica 457  
Manes.12G050200.1.p A0A2C9UTQ5 PAC:32345781 Manihot esculenta 149  
Manes.13G051600.1.p A0A2C9UQ46 PAC:32338567 Manihot esculenta 149  
Pahal.A02330.1 PAC:32528502 Panicum hallii 129  
Kalax.0003s0245.2.p PAC:32588721 Kalanchoe laxiflora 202  
Bradi3g18654.1.p A0A0Q3HQF3 PAC:32818864 Brachypodium distachyon 387  
Mapoly0003s0008.1.p A0A2R6XSN6 PAC:33010053 Marchantia polymorpha 333  
LOC_Os07g40090.1 PAC:33116425 Oryza sativa 89  
Brdisv1Per11046185m.p PAC:33248278 Brachypodium distachyon Per1 215  
Brdisv20Bd21Ref1028239m.p A0A0Q3HQF3 PAC:33468295 Brachypodium distachyon Bd21 AnntCtrl 387  
Brdisv1pangenome1041461m.p A0A0Q3HQF3 PAC:33629359 Brachypodium distachyon Pangenome 387  
Brdisv1ABR6_r1034367m.p PAC:33701073 Brachypodium distachyon ABR6 180  
Brdisv1Mon31025237m.p PAC:34286987 Brachypodium distachyon Mon3 409  
Brdisv1BdTR3C1026796m.p A0A0Q3HQF3 PAC:34468804 Brachypodium distachyon BdTR3c 387  
Brdisv1Arn11014438m.p PAC:34538553 Brachypodium distachyon Arn1 514  
Tp57577_TGAC_v2_mRNA16954 PAC:35965648 Trifolium pratense 592  
Oropetium_20150105_27530A PAC:36003410 Oropetium thomaeum 82  
DCAR_000665 PAC:36056833 Daucus carota 579  
AUR62034205-RA PAC:36284849 Chenopodium quinoa 571  

5 Publications

First Author Title Year Journal Volume Pages PubMed ID
            10388620
            11134927
            11463658
            15238265
            7783202