Protein Domain : IPR015824

Type:  Domain Name:  Phosphoglycerate kinase, N-terminal
Description:  Phosphoglycerate kinase () (PGK) is an enzyme that catalyses the formation of ATP to ADP and vice versa. In the second step of the second phase in glycolysis, 1,3-diphosphoglycerate is converted to 3-phosphoglycerate, forming one molecule of ATP. If the reverse were to occur, one molecule of ADP would be formed. This reaction is essential in most cells for the generation of ATP in aerobes, for fermentation in anaerobes and for carbon fixation in plants.PGK is found in all living organisms and its sequence has been highly conserved throughout evolution. The enzyme exists as a monomer containing two nearly equal-sized domains that correspond to the N- and C-termini of the protein (the last 15 C-terminal residues loop back into the N-terminal domain). 3-phosphoglycerate (3-PG) binds to the N-terminal, while the nucleotide substrates, MgATP or MgADP, bind to the C-terminal domain of the enzyme. This extended two-domain structure is associated with large-scale 'hinge-bending' conformational changes, similar to those found in hexokinase []. At the core of each domain is a 6-stranded parallel beta-sheet surrounded by alpha helices. Domain 1 has a parallel beta-sheet of six strands with an order of 342156, while domain 2 has a parallel beta-sheet of six strands with an order of 321456. Analysis of the reversible unfolding of yeast phosphoglycerate kinase leads to the conclusion that the two lobes are capable of folding independently, consistent with the presence of intermediates on the folding pathway with a single domain folded []. Phosphoglycerate kinase (PGK) deficiency is associated with haemolytic anaemia and mental disorders in man [].This entry represents the N-terminal domain of PGK. Short Name:  Phosphoglycerate_kinase_N

0 Child Features

1 Contains

DB identifier Type Name
IPR015911 Conserved_site Phosphoglycerate kinase, conserved site

1 Cross References

Identifier
G3DSA:3.40.50.1260

1 Found In

DB identifier Type Name
IPR001576 Family Phosphoglycerate kinase

2 GO Annotations

GO Term Gene Name
GO:0004618 IPR015824
GO:0006096 IPR015824

2 Ontology Annotations

GO Term Gene Name
GO:0004618 IPR015824
GO:0006096 IPR015824

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
evm.model.supercontig_13.69 PAC:16407877 Carica papaya 755  
evm.model.supercontig_49.165 PAC:16421081 Carica papaya 160  
29346.m000115 B9T5V1 PAC:16802745 Ricinus communis 439  
Cucsa.114960.1 PAC:16960457 Cucumis sativus 360  
orange1.1g035948m A0A067DNI0 PAC:18092830 Citrus sinensis 255  
AT1G02380.1 Q9FZ23 PAC:19650292 Arabidopsis thaliana 231  
Thhalv10008576m V4L3E0 PAC:20187553 Eutrema salsugineum 250  
Lus10040017 PAC:23173393 Linum usitatissimum 690  
Lus10019592 PAC:23142562 Linum usitatissimum 693  
Lus10011701 PAC:23156313 Linum usitatissimum 169  
Lus10012385 PAC:23176801 Linum usitatissimum 242  
Potri.005G209100.1 B9H879 PAC:27030202 Populus trichocarpa 293  
Potri.008G084500.4 PAC:27040063 Populus trichocarpa 263  
Potri.010G154100.1 Q6IWY2 PAC:26981337 Populus trichocarpa 248  
Potri.010G154100.4 PAC:26981340 Populus trichocarpa 178  
Potri.010G154100.2 PAC:26981338 Populus trichocarpa 234  
Gorai.007G093800.11 A0A0D2QNS4 PAC:26783802 Gossypium raimondii 223  
Gorai.007G093800.5 A0A0D2QNS4 PAC:26783801 Gossypium raimondii 223  
Thecc1EG008259t1 A0A061E3F0 PAC:27463177 Theobroma cacao 212  
Araha.1786s0005.1.p PAC:28853533 Arabidopsis halleri 138  
Araha.6111s0001.1.p PAC:28861338 Arabidopsis halleri 99  
Glyma.05G121900.1.p K7KPT5 PAC:30524160 Glycine max 385  
Glyma.07G161300.1.p I1KKP1 PAC:30494355 Glycine max 371  
Glyma.08G182900.1.p I1KUH3 PAC:30537631 Glycine max 405  
Brara.B02376.1.p A0A398AJB4 PAC:30607659 Brassica rapa FPsc 218  
Brara.H02134.1.p A0A397YL70 PAC:30649853 Brassica rapa FPsc 254  
Brara.H02134.2.p A0A397YDR7 PAC:30649854 Brassica rapa FPsc 221  
Bostr.12659s0367.1.p PAC:30652517 Boechera stricta 240  
Medtr2g007260.1 G7IJW4 PAC:31067666 Medicago truncatula 409  
Medtr8g066260.1 G7LGW9 PAC:31069559 Medicago truncatula 240  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            2124145
            6689547
            10593256