Protein Domain : IPR004330

Type:  Domain Name:  FAR1 DNA binding domain
Description:  Phytochrome A is the primary photoreceptor for mediating various far-red light-induced responses in higher plants. It has been found that the proteins governing this response, which include FAR-RED ELONGATED HYPOCOTYL3 (FHY3) and FAR-RED-IMPAIRED RESPONSE1 (FAR1), are a pair of homologous proteins sharing significant sequence homology to mutator-like transposases. These proteins appear to be novel transcription factors, which are essential for activating the expression of FHY1 and FHL (for FHY1-like) and related genes, whose products are required for light-induced phytochrome A nuclear accumulation and subsequent light responses in plants.The FRS (FAR1 Related Sequences) family of proteins share a similar domain structure to mutator-like transposases, including an N-terminal C2H2 zinc finger domain, a central putative core transposase domain, and a C-terminal SWIM motif (named after SWI2/SNF and MuDR transposases). It seems plausible that the FRS family represent transcription factors derived from mutator-like transposases [, ]. This entry represents a domain found in FAR1 and FRS proteins. It contains a WRKY like fold and is therefore most likely a zinc binding DNA-binding domain. Short Name:  FAR1_DNA_bnd_dom

0 Child Features

0 Contains

1 Cross References

Identifier
PF03101

0 Found In

0 GO Annotation

0 Ontology Annotations

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
evm.TU.contig_24967.4 PAC:16429377 Carica papaya 668  
evm.TU.contig_45591.1 PAC:16432200 Carica papaya 211  
evm.model.supercontig_10.74 PAC:16404692 Carica papaya 944  
evm.model.supercontig_107.20 PAC:16405322 Carica papaya 888  
evm.model.supercontig_113.2 PAC:16406028 Carica papaya 668  
evm.model.supercontig_151.57 PAC:16409577 Carica papaya 702  
evm.model.supercontig_16.55 PAC:16410090 Carica papaya 757  
evm.model.supercontig_167.15 PAC:16410476 Carica papaya 669  
evm.model.supercontig_167.13 PAC:16410474 Carica papaya 666  
evm.model.supercontig_195.42 PAC:16412296 Carica papaya 257  
evm.model.supercontig_60.4 PAC:16423729 Carica papaya 319  
evm.model.supercontig_8.288 PAC:16426583 Carica papaya 846  
evm.model.supercontig_8.53 PAC:16426647 Carica papaya 211  
evm.model.supercontig_8.51 PAC:16426645 Carica papaya 399  
evm.model.supercontig_8.54 PAC:16426648 Carica papaya 234  
evm.model.supercontig_84.88 PAC:16427374 Carica papaya 259  
evm.model.supercontig_9.289 PAC:16428189 Carica papaya 247  
evm.model.supercontig_9.288 PAC:16428188 Carica papaya 208  
evm.model.supercontig_9.294 PAC:16428195 Carica papaya 257  
evm.model.supercontig_9.285 PAC:16428185 Carica papaya 246  
29758.m000681 B9SGH0 PAC:16808074 Ricinus communis 656  
29841.m002892 B9RVA1 PAC:16810605 Ricinus communis 509  
29889.m003255 B9RZL5 PAC:16812202 Ricinus communis 749  
29929.m004534 B9RM30 PAC:16813774 Ricinus communis 256  
29942.m000750 B9S6M5 PAC:16814309 Ricinus communis 523  
30094.m000671 B9SCP4 PAC:16817588 Ricinus communis 260  
30106.m000672 B9S4Z1 PAC:16817816 Ricinus communis 254  
30147.m014297 B9R9F6 PAC:16820308 Ricinus communis 216  
30178.m000862 B9SMQ0 PAC:16822836 Ricinus communis 255  
30178.m000863 B9SMQ1 PAC:16822837 Ricinus communis 212  

2 Publications

First Author Title Year Journal Volume Pages PubMed ID
            18715961
            15591448