Gene : Gorai.006G085600 G. raimondii v2.1
Defline:  (1 of 4) PTHR12937 - VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28 Genomic Order:  856
Name:  ? Gorai.006G085600 Secondary Identifier:  ? PAC:26832555
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G085600 0.5kb upstream 0.5kb upstream 2701 true Chr06: 32020741-32023441 Gossypium raimondii
Gorai.006G085600 0.5kb upstream 0.5kb upstream 500 false Chr06: 32022942-32023441 Gossypium raimondii
Gorai.006G085600 0.5kb downstream 0.5kb downstream 2701 true Chr06: 32020241-32022941 Gossypium raimondii
Gorai.006G085600 0.5kb downstream 0.5kb downstream 500 false Chr06: 32020241-32020740 Gossypium raimondii
Gorai.006G085600 1.0kb upstream 1.0kb upstream 3201 true Chr06: 32020741-32023941 Gossypium raimondii
Gorai.006G085600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 32022942-32023941 Gossypium raimondii
Gorai.006G085600 1.0kb downstream 1.0kb downstream 3201 true Chr06: 32019741-32022941 Gossypium raimondii
Gorai.006G085600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 32019741-32020740 Gossypium raimondii
Gorai.006G085600 2.0kb upstream 2.0kb upstream 4201 true Chr06: 32020741-32024941 Gossypium raimondii
Gorai.006G085600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 32022942-32024941 Gossypium raimondii
Gorai.006G085600 2.0kb downstream 2.0kb downstream 4201 true Chr06: 32018741-32022941 Gossypium raimondii
Gorai.006G085600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 32018741-32020740 Gossypium raimondii
Gorai.006G085600 5.0kb upstream 5.0kb upstream 7201 true Chr06: 32020741-32027941 Gossypium raimondii
Gorai.006G085600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 32022942-32027941 Gossypium raimondii
Gorai.006G085600 5.0kb downstream 5.0kb downstream 7201 true Chr06: 32015741-32022941 Gossypium raimondii
Gorai.006G085600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 32015741-32020740 Gossypium raimondii
Gorai.006G085600 10.0kb upstream 10.0kb upstream 12201 true Chr06: 32020741-32032941 Gossypium raimondii
Gorai.006G085600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 32022942-32032941 Gossypium raimondii
Gorai.006G085600 10.0kb downstream 10.0kb downstream 12201 true Chr06: 32010741-32022941 Gossypium raimondii
Gorai.006G085600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 32010741-32020740 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838462 5264 Brassicales-Malvales View MSA
124341330 5266 SBM View MSA
124244249 5268 Malvidae View MSA
124064645 5270 Rosid View MSA
123751452 5271 Pentapetalae View MSA
122791006 5272 Eudicot View MSA
122044389 5273 Angiosperm View MSA
121350792 5274 Embryophyte View MSA
123425897 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain