Gene : Gorai.008G043800 G. raimondii v2.1
Defline:  (1 of 5) PF05562 - Cold acclimation protein WCOR413 (WCOR413) Genomic Order:  438
Name:  ? Gorai.008G043800 Secondary Identifier:  ? PAC:26815081
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.008G043800 0.5kb upstream 0.5kb upstream 2201 true Chr08: 5808208-5810408 Gossypium raimondii
Gorai.008G043800 0.5kb upstream 0.5kb upstream 500 false Chr08: 5809909-5810408 Gossypium raimondii
Gorai.008G043800 0.5kb downstream 0.5kb downstream 2201 true Chr08: 5807708-5809908 Gossypium raimondii
Gorai.008G043800 0.5kb downstream 0.5kb downstream 500 false Chr08: 5807708-5808207 Gossypium raimondii
Gorai.008G043800 1.0kb upstream 1.0kb upstream 2701 true Chr08: 5808208-5810908 Gossypium raimondii
Gorai.008G043800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5809909-5810908 Gossypium raimondii
Gorai.008G043800 1.0kb downstream 1.0kb downstream 2701 true Chr08: 5807208-5809908 Gossypium raimondii
Gorai.008G043800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5807208-5808207 Gossypium raimondii
Gorai.008G043800 2.0kb upstream 2.0kb upstream 3701 true Chr08: 5808208-5811908 Gossypium raimondii
Gorai.008G043800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5809909-5811908 Gossypium raimondii
Gorai.008G043800 2.0kb downstream 2.0kb downstream 3701 true Chr08: 5806208-5809908 Gossypium raimondii
Gorai.008G043800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5806208-5808207 Gossypium raimondii
Gorai.008G043800 5.0kb upstream 5.0kb upstream 6701 true Chr08: 5808208-5814908 Gossypium raimondii
Gorai.008G043800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5809909-5814908 Gossypium raimondii
Gorai.008G043800 5.0kb downstream 5.0kb downstream 6701 true Chr08: 5803208-5809908 Gossypium raimondii
Gorai.008G043800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5803208-5808207 Gossypium raimondii
Gorai.008G043800 10.0kb upstream 10.0kb upstream 11701 true Chr08: 5808208-5819908 Gossypium raimondii
Gorai.008G043800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5809909-5819908 Gossypium raimondii
Gorai.008G043800 10.0kb downstream 10.0kb downstream 11701 true Chr08: 5798208-5809908 Gossypium raimondii
Gorai.008G043800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5798208-5808207 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840703 5264 Brassicales-Malvales View MSA
124348627 5266 SBM View MSA
124246161 5268 Malvidae View MSA
124069489 5270 Rosid View MSA
123743524 5271 Pentapetalae View MSA
122795591 5272 Eudicot View MSA
122043105 5273 Angiosperm View MSA
121346555 5274 Embryophyte View MSA
123380405 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain