Gene : Gorai.008G045800 G. raimondii v2.1
Defline:  (1 of 2) PTHR24057:SF3 - SHAGGY-RELATED PROTEIN KINASE DELTA-RELATED Genomic Order:  458
Name:  ? Gorai.008G045800 Secondary Identifier:  ? PAC:26812972
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.008G045800 0.5kb upstream 0.5kb upstream 5680 true Chr08: 6198649-6204328 Gossypium raimondii
Gorai.008G045800 0.5kb upstream 0.5kb upstream 500 false Chr08: 6203829-6204328 Gossypium raimondii
Gorai.008G045800 0.5kb downstream 0.5kb downstream 5680 true Chr08: 6198149-6203828 Gossypium raimondii
Gorai.008G045800 0.5kb downstream 0.5kb downstream 500 false Chr08: 6198149-6198648 Gossypium raimondii
Gorai.008G045800 1.0kb upstream 1.0kb upstream 6180 true Chr08: 6198649-6204828 Gossypium raimondii
Gorai.008G045800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 6203829-6204828 Gossypium raimondii
Gorai.008G045800 1.0kb downstream 1.0kb downstream 6180 true Chr08: 6197649-6203828 Gossypium raimondii
Gorai.008G045800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 6197649-6198648 Gossypium raimondii
Gorai.008G045800 2.0kb upstream 2.0kb upstream 7180 true Chr08: 6198649-6205828 Gossypium raimondii
Gorai.008G045800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 6203829-6205828 Gossypium raimondii
Gorai.008G045800 2.0kb downstream 2.0kb downstream 7180 true Chr08: 6196649-6203828 Gossypium raimondii
Gorai.008G045800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 6196649-6198648 Gossypium raimondii
Gorai.008G045800 5.0kb upstream 5.0kb upstream 10180 true Chr08: 6198649-6208828 Gossypium raimondii
Gorai.008G045800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 6203829-6208828 Gossypium raimondii
Gorai.008G045800 5.0kb downstream 5.0kb downstream 10180 true Chr08: 6193649-6203828 Gossypium raimondii
Gorai.008G045800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 6193649-6198648 Gossypium raimondii
Gorai.008G045800 10.0kb upstream 10.0kb upstream 15180 true Chr08: 6198649-6213828 Gossypium raimondii
Gorai.008G045800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 6203829-6213828 Gossypium raimondii
Gorai.008G045800 10.0kb downstream 10.0kb downstream 15180 true Chr08: 6188649-6203828 Gossypium raimondii
Gorai.008G045800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 6188649-6198648 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121515557 5273 Angiosperm Singleton cluster - no MSA
123809530 5264 Brassicales-Malvales Singleton cluster - no MSA
124306285 5266 SBM Singleton cluster - no MSA
124156478 5268 Malvidae Singleton cluster - no MSA
123881140 5270 Rosid Singleton cluster - no MSA
123464203 5271 Pentapetalae Singleton cluster - no MSA
122499532 5272 Eudicot Singleton cluster - no MSA
120788467 5274 Embryophyte Singleton cluster - no MSA
122830198 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain