Gene : Gorai.012G045500 G. raimondii v2.1
Defline:  (1 of 1) PTHR16079 - UBIQUITIN LIGASE PROTEIN CHFR Genomic Order:  455
Name:  ? Gorai.012G045500 Secondary Identifier:  ? PAC:26827382
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-7511 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.012G045500 0.5kb upstream 0.5kb upstream 15336 true Chr12: 5687863-5703198 Gossypium raimondii
Gorai.012G045500 0.5kb upstream 0.5kb upstream 500 false Chr12: 5702699-5703198 Gossypium raimondii
Gorai.012G045500 0.5kb downstream 0.5kb downstream 15336 true Chr12: 5687363-5702698 Gossypium raimondii
Gorai.012G045500 0.5kb downstream 0.5kb downstream 500 false Chr12: 5687363-5687862 Gossypium raimondii
Gorai.012G045500 1.0kb upstream 1.0kb upstream 15836 true Chr12: 5687863-5703698 Gossypium raimondii
Gorai.012G045500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 5702699-5703698 Gossypium raimondii
Gorai.012G045500 1.0kb downstream 1.0kb downstream 15836 true Chr12: 5686863-5702698 Gossypium raimondii
Gorai.012G045500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 5686863-5687862 Gossypium raimondii
Gorai.012G045500 2.0kb upstream 2.0kb upstream 16836 true Chr12: 5687863-5704698 Gossypium raimondii
Gorai.012G045500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 5702699-5704698 Gossypium raimondii
Gorai.012G045500 2.0kb downstream 2.0kb downstream 16836 true Chr12: 5685863-5702698 Gossypium raimondii
Gorai.012G045500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 5685863-5687862 Gossypium raimondii
Gorai.012G045500 5.0kb upstream 5.0kb upstream 19836 true Chr12: 5687863-5707698 Gossypium raimondii
Gorai.012G045500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 5702699-5707698 Gossypium raimondii
Gorai.012G045500 5.0kb downstream 5.0kb downstream 19836 true Chr12: 5682863-5702698 Gossypium raimondii
Gorai.012G045500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 5682863-5687862 Gossypium raimondii
Gorai.012G045500 10.0kb upstream 10.0kb upstream 24836 true Chr12: 5687863-5712698 Gossypium raimondii
Gorai.012G045500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 5702699-5712698 Gossypium raimondii
Gorai.012G045500 10.0kb downstream 10.0kb downstream 24836 true Chr12: 5677863-5702698 Gossypium raimondii
Gorai.012G045500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 5677863-5687862 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837060 5264 Brassicales-Malvales View MSA
124322238 5266 SBM View MSA
124243487 5268 Malvidae View MSA
124065597 5270 Rosid View MSA
123740046 5271 Pentapetalae View MSA
122793023 5272 Eudicot View MSA
122047021 5273 Angiosperm View MSA
121310682 5274 Embryophyte View MSA
123348107 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain