Gene : Gorai.005G000700 G. raimondii v2.1
Defline:  (1 of 7) PF03108//PF04434//PF10551 - MuDR family transposase (DBD_Tnp_Mut) // SWIM zinc finger (SWIM) // MULE transposase domain (MULE) Genomic Order:  7
Name:  ? Gorai.005G000700 Secondary Identifier:  ? PAC:26801268
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G000700 0.5kb upstream 0.5kb upstream 2268 true Chr05: 31260-33527 Gossypium raimondii
Gorai.005G000700 0.5kb upstream 0.5kb upstream 500 false Chr05: 31260-31759 Gossypium raimondii
Gorai.005G000700 0.5kb downstream 0.5kb downstream 2268 true Chr05: 31760-34027 Gossypium raimondii
Gorai.005G000700 0.5kb downstream 0.5kb downstream 500 false Chr05: 33528-34027 Gossypium raimondii
Gorai.005G000700 1.0kb upstream 1.0kb upstream 2768 true Chr05: 30760-33527 Gossypium raimondii
Gorai.005G000700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 30760-31759 Gossypium raimondii
Gorai.005G000700 1.0kb downstream 1.0kb downstream 2768 true Chr05: 31760-34527 Gossypium raimondii
Gorai.005G000700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 33528-34527 Gossypium raimondii
Gorai.005G000700 2.0kb upstream 2.0kb upstream 3768 true Chr05: 29760-33527 Gossypium raimondii
Gorai.005G000700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 29760-31759 Gossypium raimondii
Gorai.005G000700 2.0kb downstream 2.0kb downstream 3768 true Chr05: 31760-35527 Gossypium raimondii
Gorai.005G000700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 33528-35527 Gossypium raimondii
Gorai.005G000700 5.0kb upstream 5.0kb upstream 6768 true Chr05: 26760-33527 Gossypium raimondii
Gorai.005G000700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 26760-31759 Gossypium raimondii
Gorai.005G000700 5.0kb downstream 5.0kb downstream 6768 true Chr05: 31760-38527 Gossypium raimondii
Gorai.005G000700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 33528-38527 Gossypium raimondii
Gorai.005G000700 10.0kb upstream 10.0kb upstream 11768 true Chr05: 21760-33527 Gossypium raimondii
Gorai.005G000700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 21760-31759 Gossypium raimondii
Gorai.005G000700 10.0kb downstream 10.0kb downstream 11768 true Chr05: 31760-43527 Gossypium raimondii
Gorai.005G000700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 33528-43527 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825356 5264 Brassicales-Malvales View MSA
124347074 5266 SBM View MSA
124245295 5268 Malvidae View MSA
124069864 5270 Rosid View MSA
123753345 5271 Pentapetalae View MSA
122797917 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain