Gene : Gorai.003G109000 G. raimondii v2.1
Defline:  (1 of 1) PTHR12741:SF5 - CALLOSE SYNTHASE 10 Genomic Order:  1090
Name:  ? Gorai.003G109000 Secondary Identifier:  ? PAC:26799994
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-6773 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.003G109000 0.5kb upstream 0.5kb upstream 29570 true Chr03: 33337768-33367337 Gossypium raimondii
Gorai.003G109000 0.5kb upstream 0.5kb upstream 500 false Chr03: 33366838-33367337 Gossypium raimondii
Gorai.003G109000 0.5kb downstream 0.5kb downstream 29570 true Chr03: 33337268-33366837 Gossypium raimondii
Gorai.003G109000 0.5kb downstream 0.5kb downstream 500 false Chr03: 33337268-33337767 Gossypium raimondii
Gorai.003G109000 1.0kb upstream 1.0kb upstream 30070 true Chr03: 33337768-33367837 Gossypium raimondii
Gorai.003G109000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 33366838-33367837 Gossypium raimondii
Gorai.003G109000 1.0kb downstream 1.0kb downstream 30070 true Chr03: 33336768-33366837 Gossypium raimondii
Gorai.003G109000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 33336768-33337767 Gossypium raimondii
Gorai.003G109000 2.0kb upstream 2.0kb upstream 31070 true Chr03: 33337768-33368837 Gossypium raimondii
Gorai.003G109000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 33366838-33368837 Gossypium raimondii
Gorai.003G109000 2.0kb downstream 2.0kb downstream 31070 true Chr03: 33335768-33366837 Gossypium raimondii
Gorai.003G109000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 33335768-33337767 Gossypium raimondii
Gorai.003G109000 5.0kb upstream 5.0kb upstream 34070 true Chr03: 33337768-33371837 Gossypium raimondii
Gorai.003G109000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 33366838-33371837 Gossypium raimondii
Gorai.003G109000 5.0kb downstream 5.0kb downstream 34070 true Chr03: 33332768-33366837 Gossypium raimondii
Gorai.003G109000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 33332768-33337767 Gossypium raimondii
Gorai.003G109000 10.0kb upstream 10.0kb upstream 39070 true Chr03: 33337768-33376837 Gossypium raimondii
Gorai.003G109000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 33366838-33376837 Gossypium raimondii
Gorai.003G109000 10.0kb downstream 10.0kb downstream 39070 true Chr03: 33327768-33366837 Gossypium raimondii
Gorai.003G109000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 33327768-33337767 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828682 5264 Brassicales-Malvales View MSA
124350687 5266 SBM View MSA
124241987 5268 Malvidae View MSA
124064291 5270 Rosid View MSA
123749286 5271 Pentapetalae View MSA
122796440 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain