Gene : Gorai.003G042900 G. raimondii v2.1
Defline:  (1 of 2) PTHR33222:SF2 - PROTEIN CURVATURE THYLAKOID 1D, CHLOROPLASTIC Genomic Order:  429
Name:  ? Gorai.003G042900 Secondary Identifier:  ? PAC:26799308
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.003G042900 0.5kb upstream 0.5kb upstream 1942 true Chr03: 5488039-5489980 Gossypium raimondii
Gorai.003G042900 0.5kb upstream 0.5kb upstream 500 false Chr03: 5488039-5488538 Gossypium raimondii
Gorai.003G042900 0.5kb downstream 0.5kb downstream 1942 true Chr03: 5488539-5490480 Gossypium raimondii
Gorai.003G042900 0.5kb downstream 0.5kb downstream 500 false Chr03: 5489981-5490480 Gossypium raimondii
Gorai.003G042900 1.0kb upstream 1.0kb upstream 2442 true Chr03: 5487539-5489980 Gossypium raimondii
Gorai.003G042900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 5487539-5488538 Gossypium raimondii
Gorai.003G042900 1.0kb downstream 1.0kb downstream 2442 true Chr03: 5488539-5490980 Gossypium raimondii
Gorai.003G042900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 5489981-5490980 Gossypium raimondii
Gorai.003G042900 2.0kb upstream 2.0kb upstream 3442 true Chr03: 5486539-5489980 Gossypium raimondii
Gorai.003G042900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 5486539-5488538 Gossypium raimondii
Gorai.003G042900 2.0kb downstream 2.0kb downstream 3442 true Chr03: 5488539-5491980 Gossypium raimondii
Gorai.003G042900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 5489981-5491980 Gossypium raimondii
Gorai.003G042900 5.0kb upstream 5.0kb upstream 6442 true Chr03: 5483539-5489980 Gossypium raimondii
Gorai.003G042900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 5483539-5488538 Gossypium raimondii
Gorai.003G042900 5.0kb downstream 5.0kb downstream 6442 true Chr03: 5488539-5494980 Gossypium raimondii
Gorai.003G042900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 5489981-5494980 Gossypium raimondii
Gorai.003G042900 10.0kb upstream 10.0kb upstream 11442 true Chr03: 5478539-5489980 Gossypium raimondii
Gorai.003G042900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 5478539-5488538 Gossypium raimondii
Gorai.003G042900 10.0kb downstream 10.0kb downstream 11442 true Chr03: 5488539-5499980 Gossypium raimondii
Gorai.003G042900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 5489981-5499980 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123805721 5264 Brassicales-Malvales Singleton cluster - no MSA
124302678 5266 SBM Singleton cluster - no MSA
124153472 5268 Malvidae Singleton cluster - no MSA
123878585 5270 Rosid Singleton cluster - no MSA
123461970 5271 Pentapetalae Singleton cluster - no MSA
122497315 5272 Eudicot Singleton cluster - no MSA
122051367 5273 Angiosperm View MSA
121345207 5274 Embryophyte View MSA
123425732 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain