Gene : Gorai.002G173100 G. raimondii v2.1
Defline:  (1 of 6) PTHR24067:SF117 - UBIQUITIN-CONJUGATING ENZYME E2 VARIANT 1D Genomic Order:  1731
Name:  ? Gorai.002G173100 Secondary Identifier:  ? PAC:26792495
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-7511 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.002G173100 0.5kb upstream 0.5kb upstream 5850 true Chr02: 44073714-44079563 Gossypium raimondii
Gorai.002G173100 0.5kb upstream 0.5kb upstream 500 false Chr02: 44073714-44074213 Gossypium raimondii
Gorai.002G173100 0.5kb downstream 0.5kb downstream 5850 true Chr02: 44074214-44080063 Gossypium raimondii
Gorai.002G173100 0.5kb downstream 0.5kb downstream 500 false Chr02: 44079564-44080063 Gossypium raimondii
Gorai.002G173100 1.0kb upstream 1.0kb upstream 6350 true Chr02: 44073214-44079563 Gossypium raimondii
Gorai.002G173100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 44073214-44074213 Gossypium raimondii
Gorai.002G173100 1.0kb downstream 1.0kb downstream 6350 true Chr02: 44074214-44080563 Gossypium raimondii
Gorai.002G173100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 44079564-44080563 Gossypium raimondii
Gorai.002G173100 2.0kb upstream 2.0kb upstream 7350 true Chr02: 44072214-44079563 Gossypium raimondii
Gorai.002G173100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 44072214-44074213 Gossypium raimondii
Gorai.002G173100 2.0kb downstream 2.0kb downstream 7350 true Chr02: 44074214-44081563 Gossypium raimondii
Gorai.002G173100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 44079564-44081563 Gossypium raimondii
Gorai.002G173100 5.0kb upstream 5.0kb upstream 10350 true Chr02: 44069214-44079563 Gossypium raimondii
Gorai.002G173100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 44069214-44074213 Gossypium raimondii
Gorai.002G173100 5.0kb downstream 5.0kb downstream 10350 true Chr02: 44074214-44084563 Gossypium raimondii
Gorai.002G173100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 44079564-44084563 Gossypium raimondii
Gorai.002G173100 10.0kb upstream 10.0kb upstream 15350 true Chr02: 44064214-44079563 Gossypium raimondii
Gorai.002G173100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 44064214-44074213 Gossypium raimondii
Gorai.002G173100 10.0kb downstream 10.0kb downstream 15350 true Chr02: 44074214-44089563 Gossypium raimondii
Gorai.002G173100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 44079564-44089563 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837333 5264 Brassicales-Malvales View MSA
124342282 5266 SBM View MSA
124253916 5268 Malvidae View MSA
124063441 5270 Rosid View MSA
123741695 5271 Pentapetalae View MSA
122789477 5272 Eudicot View MSA
122045829 5273 Angiosperm View MSA
121310510 5274 Embryophyte View MSA
123425410 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain