Gene : Gorai.001G162500 G. raimondii v2.1
Defline:  (1 of 2) PTHR10422 - CYTOCHROME C OXIDASE SUBUNIT 1 Genomic Order:  1625
Name:  ? Gorai.001G162500 Secondary Identifier:  ? PAC:26822229
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-3781 Gossypium raimondii pathologic  
Graimondii PWY-7279 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G162500 0.5kb upstream 0.5kb upstream 2093 true Chr01: 23367206-23369298 Gossypium raimondii
Gorai.001G162500 0.5kb upstream 0.5kb upstream 500 false Chr01: 23368799-23369298 Gossypium raimondii
Gorai.001G162500 0.5kb downstream 0.5kb downstream 2093 true Chr01: 23366706-23368798 Gossypium raimondii
Gorai.001G162500 0.5kb downstream 0.5kb downstream 500 false Chr01: 23366706-23367205 Gossypium raimondii
Gorai.001G162500 1.0kb upstream 1.0kb upstream 2593 true Chr01: 23367206-23369798 Gossypium raimondii
Gorai.001G162500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 23368799-23369798 Gossypium raimondii
Gorai.001G162500 1.0kb downstream 1.0kb downstream 2593 true Chr01: 23366206-23368798 Gossypium raimondii
Gorai.001G162500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 23366206-23367205 Gossypium raimondii
Gorai.001G162500 2.0kb upstream 2.0kb upstream 3593 true Chr01: 23367206-23370798 Gossypium raimondii
Gorai.001G162500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 23368799-23370798 Gossypium raimondii
Gorai.001G162500 2.0kb downstream 2.0kb downstream 3593 true Chr01: 23365206-23368798 Gossypium raimondii
Gorai.001G162500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 23365206-23367205 Gossypium raimondii
Gorai.001G162500 5.0kb upstream 5.0kb upstream 6593 true Chr01: 23367206-23373798 Gossypium raimondii
Gorai.001G162500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 23368799-23373798 Gossypium raimondii
Gorai.001G162500 5.0kb downstream 5.0kb downstream 6593 true Chr01: 23362206-23368798 Gossypium raimondii
Gorai.001G162500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 23362206-23367205 Gossypium raimondii
Gorai.001G162500 10.0kb upstream 10.0kb upstream 11593 true Chr01: 23367206-23378798 Gossypium raimondii
Gorai.001G162500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 23368799-23378798 Gossypium raimondii
Gorai.001G162500 10.0kb downstream 10.0kb downstream 11593 true Chr01: 23357206-23368798 Gossypium raimondii
Gorai.001G162500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 23357206-23367205 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026781 5273 Angiosperm View MSA
123837244 5264 Brassicales-Malvales View MSA
124322268 5266 SBM View MSA
124247775 5268 Malvidae View MSA
123952190 5270 Rosid View MSA
123750940 5271 Pentapetalae View MSA
122794080 5272 Eudicot View MSA
121348518 5274 Embryophyte View MSA
123380893 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain