Gene : Gorai.001G041400 G. raimondii v2.1
Defline:  (1 of 3) PTHR22603:SF24 - PROTEIN CKA-1, ISOFORM A Genomic Order:  414
Name:  ? Gorai.001G041400 Secondary Identifier:  ? PAC:26823969
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-3385 Gossypium raimondii pathologic  
Graimondii PWY3O-450 Gossypium raimondii pathologic  
Graimondii PWY4FS-6 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G041400 0.5kb upstream 0.5kb upstream 5595 true Chr01: 3800623-3806217 Gossypium raimondii
Gorai.001G041400 0.5kb upstream 0.5kb upstream 500 false Chr01: 3805718-3806217 Gossypium raimondii
Gorai.001G041400 0.5kb downstream 0.5kb downstream 5595 true Chr01: 3800123-3805717 Gossypium raimondii
Gorai.001G041400 0.5kb downstream 0.5kb downstream 500 false Chr01: 3800123-3800622 Gossypium raimondii
Gorai.001G041400 1.0kb upstream 1.0kb upstream 6095 true Chr01: 3800623-3806717 Gossypium raimondii
Gorai.001G041400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 3805718-3806717 Gossypium raimondii
Gorai.001G041400 1.0kb downstream 1.0kb downstream 6095 true Chr01: 3799623-3805717 Gossypium raimondii
Gorai.001G041400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 3799623-3800622 Gossypium raimondii
Gorai.001G041400 2.0kb upstream 2.0kb upstream 7095 true Chr01: 3800623-3807717 Gossypium raimondii
Gorai.001G041400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 3805718-3807717 Gossypium raimondii
Gorai.001G041400 2.0kb downstream 2.0kb downstream 7095 true Chr01: 3798623-3805717 Gossypium raimondii
Gorai.001G041400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 3798623-3800622 Gossypium raimondii
Gorai.001G041400 5.0kb upstream 5.0kb upstream 10095 true Chr01: 3800623-3810717 Gossypium raimondii
Gorai.001G041400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 3805718-3810717 Gossypium raimondii
Gorai.001G041400 5.0kb downstream 5.0kb downstream 10095 true Chr01: 3795623-3805717 Gossypium raimondii
Gorai.001G041400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 3795623-3800622 Gossypium raimondii
Gorai.001G041400 10.0kb upstream 10.0kb upstream 15095 true Chr01: 3800623-3815717 Gossypium raimondii
Gorai.001G041400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 3805718-3815717 Gossypium raimondii
Gorai.001G041400 10.0kb downstream 10.0kb downstream 15095 true Chr01: 3790623-3805717 Gossypium raimondii
Gorai.001G041400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 3790623-3800622 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831797 5264 Brassicales-Malvales View MSA
124338804 5266 SBM View MSA
124248672 5268 Malvidae View MSA
124069180 5270 Rosid View MSA
123746925 5271 Pentapetalae View MSA
122797485 5272 Eudicot View MSA
122047896 5273 Angiosperm View MSA
121347088 5274 Embryophyte View MSA
123426626 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain