Gene : Potri.016G142900 P. trichocarpa v3.0
Defline:  (1 of 2) 5.4.2.11//5.4.2.12 - Phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) / Phosphoglyceromutase // Phosphoglycerate mutase (2,3-diphosphoglycerate-independent) / Phosphoglyceromutase Genomic Order:  1429
Name:  ? Potri.016G142900 Secondary Identifier:  ? PAC:27011564
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-1042 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5464 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5723 Populus trichocarpa pathologic  
Ptrichocarpa PWY66-399 Populus trichocarpa pathologic  
Ptrichocarpa ANAGLYCOLYSIS-PWY Populus trichocarpa pathologic  
Ptrichocarpa GLUCONEO-PWY Populus trichocarpa pathologic  
Ptrichocarpa ANAEROFRUCAT-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G142900 0.5kb upstream 0.5kb upstream 5482 true Chr16: 14376639-14382120 Populus trichocarpa
Potri.016G142900 0.5kb upstream 0.5kb upstream 500 false Chr16: 14381621-14382120 Populus trichocarpa
Potri.016G142900 0.5kb downstream 0.5kb downstream 5482 true Chr16: 14376139-14381620 Populus trichocarpa
Potri.016G142900 0.5kb downstream 0.5kb downstream 500 false Chr16: 14376139-14376638 Populus trichocarpa
Potri.016G142900 1.0kb upstream 1.0kb upstream 5982 true Chr16: 14376639-14382620 Populus trichocarpa
Potri.016G142900 1.0kb upstream 1.0kb upstream 1000 false Chr16: 14381621-14382620 Populus trichocarpa
Potri.016G142900 1.0kb downstream 1.0kb downstream 5982 true Chr16: 14375639-14381620 Populus trichocarpa
Potri.016G142900 1.0kb downstream 1.0kb downstream 1000 false Chr16: 14375639-14376638 Populus trichocarpa
Potri.016G142900 2.0kb upstream 2.0kb upstream 6982 true Chr16: 14376639-14383620 Populus trichocarpa
Potri.016G142900 2.0kb upstream 2.0kb upstream 2000 false Chr16: 14381621-14383620 Populus trichocarpa
Potri.016G142900 2.0kb downstream 2.0kb downstream 6982 true Chr16: 14374639-14381620 Populus trichocarpa
Potri.016G142900 2.0kb downstream 2.0kb downstream 2000 false Chr16: 14374639-14376638 Populus trichocarpa
Potri.016G142900 5.0kb upstream 5.0kb upstream 9982 true Chr16: 14376639-14386620 Populus trichocarpa
Potri.016G142900 5.0kb upstream 5.0kb upstream 5000 false Chr16: 14381621-14386620 Populus trichocarpa
Potri.016G142900 5.0kb downstream 5.0kb downstream 9982 true Chr16: 14371639-14381620 Populus trichocarpa
Potri.016G142900 5.0kb downstream 5.0kb downstream 5000 false Chr16: 14371639-14376638 Populus trichocarpa
Potri.016G142900 10.0kb upstream 10.0kb upstream 14982 true Chr16: 14376639-14391620 Populus trichocarpa
Potri.016G142900 10.0kb upstream 10.0kb upstream 10000 false Chr16: 14381621-14391620 Populus trichocarpa
Potri.016G142900 10.0kb downstream 10.0kb downstream 14982 true Chr16: 14366639-14381620 Populus trichocarpa
Potri.016G142900 10.0kb downstream 10.0kb downstream 10000 false Chr16: 14366639-14376638 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.52     High High
cufflinks 8.662        
cufflinks 2.661       Low
cufflinks 3.001       Low
cufflinks 2.089       Low
cufflinks 6.569        
cufflinks 7.684        
cufflinks 8.826        
cufflinks 8.449     High  
cufflinks 11.21     High High
cufflinks 6.524        
cufflinks 2.945       Low
cufflinks 13.795     High High
cufflinks 2.562       Low
cufflinks 5.826        
cufflinks 4.288        
cufflinks 6.042        
cufflinks 8.135     High  
cufflinks 2.769       Low
cufflinks 3.528        
cufflinks 7.542        
cufflinks 7.14        
cufflinks 4.669        
cufflinks 8.498        
cufflinks 14.995       Low
cufflinks 20.103        
cufflinks 29.981     High  
cufflinks 21.378        
cufflinks 34.01     High  
cufflinks 17.347        

0 Strain