Gene : Potri.002G060600 P. trichocarpa v3.0
Defline:  (1 of 1) K01094 - phosphatidylglycerophosphatase GEP4 (GEP4) Genomic Order:  606
Name:  ? Potri.002G060600 Secondary Identifier:  ? PAC:27021047
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5269 Populus trichocarpa pathologic  
Ptrichocarpa PWY4FS-7 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G060600 0.5kb upstream 0.5kb upstream 4558 true Chr02: 4111209-4115766 Populus trichocarpa
Potri.002G060600 0.5kb upstream 0.5kb upstream 500 false Chr02: 4111209-4111708 Populus trichocarpa
Potri.002G060600 0.5kb downstream 0.5kb downstream 4558 true Chr02: 4111709-4116266 Populus trichocarpa
Potri.002G060600 0.5kb downstream 0.5kb downstream 500 false Chr02: 4115767-4116266 Populus trichocarpa
Potri.002G060600 1.0kb upstream 1.0kb upstream 5058 true Chr02: 4110709-4115766 Populus trichocarpa
Potri.002G060600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4110709-4111708 Populus trichocarpa
Potri.002G060600 1.0kb downstream 1.0kb downstream 5058 true Chr02: 4111709-4116766 Populus trichocarpa
Potri.002G060600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4115767-4116766 Populus trichocarpa
Potri.002G060600 2.0kb upstream 2.0kb upstream 6058 true Chr02: 4109709-4115766 Populus trichocarpa
Potri.002G060600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4109709-4111708 Populus trichocarpa
Potri.002G060600 2.0kb downstream 2.0kb downstream 6058 true Chr02: 4111709-4117766 Populus trichocarpa
Potri.002G060600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4115767-4117766 Populus trichocarpa
Potri.002G060600 5.0kb upstream 5.0kb upstream 9058 true Chr02: 4106709-4115766 Populus trichocarpa
Potri.002G060600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4106709-4111708 Populus trichocarpa
Potri.002G060600 5.0kb downstream 5.0kb downstream 9058 true Chr02: 4111709-4120766 Populus trichocarpa
Potri.002G060600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4115767-4120766 Populus trichocarpa
Potri.002G060600 10.0kb upstream 10.0kb upstream 14058 true Chr02: 4101709-4115766 Populus trichocarpa
Potri.002G060600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4101709-4111708 Populus trichocarpa
Potri.002G060600 10.0kb downstream 10.0kb downstream 14058 true Chr02: 4111709-4125766 Populus trichocarpa
Potri.002G060600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4115767-4125766 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.557        
cufflinks 0.625       Low
cufflinks 2.123        
cufflinks 2.187        
cufflinks 1.776        
cufflinks 1.801        
cufflinks 1.305        
cufflinks 0.949        
cufflinks 2.402        
cufflinks 2.088        
cufflinks 2.296        
cufflinks 1.017        
cufflinks 2.134        
cufflinks 1.988        
cufflinks 9.95     High High
cufflinks 0.551       Low
cufflinks 0.712       Low
cufflinks 1.349        
cufflinks 0.49       Low
cufflinks 0.986        
cufflinks 3.55       High
cufflinks 1.579        
cufflinks 2.598        
cufflinks 2.78        
cufflinks 5.932        
cufflinks 6.634        
cufflinks 5.635        
cufflinks 5.847        
cufflinks 7.024        
cufflinks 5.542        

0 Strain