Gene : Potri.001G194000 P. trichocarpa v3.0
Defline:  (1 of 3) K02903 - large subunit ribosomal protein L28e (RP-L28e, RPL28) Genomic Order:  1940
Name:  ? Potri.001G194000 Secondary Identifier:  ? PAC:27042323
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G194000 0.5kb upstream 0.5kb upstream 2642 true Chr01: 17756718-17759359 Populus trichocarpa
Potri.001G194000 0.5kb upstream 0.5kb upstream 500 false Chr01: 17756718-17757217 Populus trichocarpa
Potri.001G194000 0.5kb downstream 0.5kb downstream 2642 true Chr01: 17757218-17759859 Populus trichocarpa
Potri.001G194000 0.5kb downstream 0.5kb downstream 500 false Chr01: 17759360-17759859 Populus trichocarpa
Potri.001G194000 1.0kb upstream 1.0kb upstream 3142 true Chr01: 17756218-17759359 Populus trichocarpa
Potri.001G194000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 17756218-17757217 Populus trichocarpa
Potri.001G194000 1.0kb downstream 1.0kb downstream 3142 true Chr01: 17757218-17760359 Populus trichocarpa
Potri.001G194000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 17759360-17760359 Populus trichocarpa
Potri.001G194000 2.0kb upstream 2.0kb upstream 4142 true Chr01: 17755218-17759359 Populus trichocarpa
Potri.001G194000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 17755218-17757217 Populus trichocarpa
Potri.001G194000 2.0kb downstream 2.0kb downstream 4142 true Chr01: 17757218-17761359 Populus trichocarpa
Potri.001G194000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 17759360-17761359 Populus trichocarpa
Potri.001G194000 5.0kb upstream 5.0kb upstream 7142 true Chr01: 17752218-17759359 Populus trichocarpa
Potri.001G194000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 17752218-17757217 Populus trichocarpa
Potri.001G194000 5.0kb downstream 5.0kb downstream 7142 true Chr01: 17757218-17764359 Populus trichocarpa
Potri.001G194000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 17759360-17764359 Populus trichocarpa
Potri.001G194000 10.0kb upstream 10.0kb upstream 12142 true Chr01: 17747218-17759359 Populus trichocarpa
Potri.001G194000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 17747218-17757217 Populus trichocarpa
Potri.001G194000 10.0kb downstream 10.0kb downstream 12142 true Chr01: 17757218-17769359 Populus trichocarpa
Potri.001G194000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 17759360-17769359 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 95.866     High High
cufflinks 73.153     High  
cufflinks 45.69     High Low
cufflinks 41.462     High Low
cufflinks 86.68     High High
cufflinks 53.606     High  
cufflinks 112.474     High High
cufflinks 49.986     High  
cufflinks 61.222     High  
cufflinks 91.764     High High
cufflinks 89.343     High High
cufflinks 98.344     High High
cufflinks 56.018     High  
cufflinks 82.884     High  
cufflinks 59.231     High  
cufflinks 66.165     High  
cufflinks 64.955     High  
cufflinks 50.082     High  
cufflinks 43.817     High Low
cufflinks 44.919     High Low
cufflinks 63.421     High  
cufflinks 59.154     High  
cufflinks 71.168     High  
cufflinks 64.777     High  
cufflinks 48.808     High  
cufflinks 28.583     High  
cufflinks 32.895     High  
cufflinks 57.213     High  
cufflinks 88.898     High High
cufflinks 30.241     High  

0 Strain