Gene : Potri.013G039000 P. trichocarpa

Defline:  protein kinase family protein; similar to protein kinase domain containing protein; similar to serine/threonine protein kinase domain containing protein; [ co-ortholog (2of3) of At1g54510, ] Name:  ? Potri.013G039000
Secondary Identifier:  ? PAC:26994012

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.013G039000 5.0kb upstream 5.0kb upstream 12198   true Chr13: 2663760-2675957 Populus trichocarpa
Potri.013G039000 5.0kb upstream 5.0kb upstream 5000   false Chr13: 2670958-2675957 Populus trichocarpa
Potri.013G039000 5.0kb downstream 5.0kb downstream 12198   true Chr13: 2658760-2670957 Populus trichocarpa
Potri.013G039000 5.0kb downstream 5.0kb downstream 5000   false Chr13: 2658760-2663759 Populus trichocarpa

263 Homologs


Gene . Primary Identifier

Ortholog _ Organism . Short Name

Ortholog _ Gene . Primary Identifier
Potri.013G039000 C. papaya evm.TU.supercontig_117.74
Potri.013G039000 P. trichocarpa Potri.005G051600
Potri.013G039000 C. sinensis orange1.1g008303m.g
Potri.013G039000 P. trichocarpa Potri.005G051600
Potri.013G039000 A. thaliana AT1G54510
Potri.013G039000 P. trichocarpa Potri.005G051600
Potri.013G039000 E. salsugineum Thhalv10003908m.g
Potri.013G039000 E. salsugineum Thhalv10020328m.g
Potri.013G039000 P. trichocarpa Potri.005G051600
Potri.013G039000 C. clementina Ciclev10000599m.g
Potri.013G039000 P. trichocarpa Potri.005G051600
Potri.013G039000 C. rubella Carubv10019975m.g
Potri.013G039000 P. trichocarpa Potri.005G051600
Potri.013G039000 M. domestica MDP0000319801
Potri.013G039000 M. domestica MDP0000197837
Potri.013G039000 P. trichocarpa Potri.005G051600
Potri.013G039000 R. communis 30128.t000073
Potri.013G039000 P. trichocarpa Potri.005G051600
Potri.013G039000 P. trichocarpa Cucsa.133400
Potri.013G039000 C. sativus Potri.005G051600
Potri.013G039000 V. vinifera GSVIVG01021831001
Potri.013G039000 P. trichocarpa Potri.005G051600
Potri.013G039000 L. usitatissimum Lus10015928.g
Potri.013G039000 L. usitatissimum Lus10009186.g
Potri.013G039000 P. trichocarpa Potri.005G051600
Potri.013G039000 F. vesca gene16529-v1.0-hybrid
Potri.013G039000 P. trichocarpa Potri.005G051600
Potri.013G039000 C. subellipsoidea C-169 Genemark1.5109_g
Potri.013G039000 P. trichocarpa Potri.001G018700
Potri.013G039000 P. trichocarpa Potri.001G218100

40 Rna Seq Expressionss

Countvariance Method Conflo Count Status Countdispersionvar Library Expression Level Abundance Confhi Locus Expression Level Countuncertaintyvar
  cufflinks   963.946 OK     1.317      
  cufflinks   1467.837 OK     2.134   High  
  cufflinks   338.531 OK     0.585      
  cufflinks   1060.165 OK     1.49      
  cufflinks   333.13 OK     0.591      
  cufflinks   373.882 OK     0.506      
  cufflinks   392.767 OK     0.582      
  cufflinks   152.696 OK     0.297   Low  
  cufflinks   257.812 OK     0.41   Low  
  cufflinks   836.482 OK     1.661      
  cufflinks   1622.718 OK     2.813   High  
  cufflinks   684.674 OK     1.313      
  cufflinks   151.222 OK     0.19   Low  
  cufflinks   264.813 OK     0.456   Low  
  cufflinks   557.119 OK     0.77      
  cufflinks   508.969 OK     0.933      
  cufflinks   871.517 OK     1.395      
  cufflinks   1760.377 OK     2.82   High  
  cufflinks   575.712 OK     0.88      
  cufflinks   504.714 OK     0.977      
  cufflinks   768.894 OK     1.179      
  cufflinks   949.34 OK     1.838      
  cufflinks   2118.99 OK     3.79   High  
  cufflinks   693.775 OK     1.155      
  cufflinks     OK   Low 0.259      
  cufflinks     OK     1.424      
  cufflinks     OK     4.921      
  cufflinks     OK     2.436      
  cufflinks     OK     20.106   High  
  cufflinks     OK   Low 0.196