Gene : Ciclev10014719m.g C. clementina v1.0
Defline:  (1 of 1) PTHR32098:SF5 - LYCOPENE BETA/EPSILON CYCLASE PROTEIN Genomic Order:  1507
Name:  ? Ciclev10014719m.g Secondary Identifier:  ? PAC:20815416
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina CAROTENOID-PWY Citrus clementina pathologic  
Cclementina PWY-5943 Citrus clementina pathologic  
Cclementina PWY-5947 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10014719m.g 0.5kb upstream 0.5kb upstream 6103 true scaffold_2: 22744618-22750720 Citrus clementina
Ciclev10014719m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 22750221-22750720 Citrus clementina
Ciclev10014719m.g 0.5kb downstream 0.5kb downstream 6103 true scaffold_2: 22744118-22750220 Citrus clementina
Ciclev10014719m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 22744118-22744617 Citrus clementina
Ciclev10014719m.g 1.0kb upstream 1.0kb upstream 6603 true scaffold_2: 22744618-22751220 Citrus clementina
Ciclev10014719m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 22750221-22751220 Citrus clementina
Ciclev10014719m.g 1.0kb downstream 1.0kb downstream 6603 true scaffold_2: 22743618-22750220 Citrus clementina
Ciclev10014719m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 22743618-22744617 Citrus clementina
Ciclev10014719m.g 2.0kb upstream 2.0kb upstream 7603 true scaffold_2: 22744618-22752220 Citrus clementina
Ciclev10014719m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 22750221-22752220 Citrus clementina
Ciclev10014719m.g 2.0kb downstream 2.0kb downstream 7603 true scaffold_2: 22742618-22750220 Citrus clementina
Ciclev10014719m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 22742618-22744617 Citrus clementina
Ciclev10014719m.g 5.0kb upstream 5.0kb upstream 10603 true scaffold_2: 22744618-22755220 Citrus clementina
Ciclev10014719m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 22750221-22755220 Citrus clementina
Ciclev10014719m.g 5.0kb downstream 5.0kb downstream 10603 true scaffold_2: 22739618-22750220 Citrus clementina
Ciclev10014719m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 22739618-22744617 Citrus clementina
Ciclev10014719m.g 10.0kb upstream 10.0kb upstream 15603 true scaffold_2: 22744618-22760220 Citrus clementina
Ciclev10014719m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 22750221-22760220 Citrus clementina
Ciclev10014719m.g 10.0kb downstream 10.0kb downstream 15603 true scaffold_2: 22734618-22750220 Citrus clementina
Ciclev10014719m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 22734618-22744617 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124340532 5266 SBM View MSA
124238742 5268 Malvidae View MSA
124061081 5270 Rosid View MSA
123739346 5271 Pentapetalae View MSA
122787287 5272 Eudicot View MSA
122042056 5273 Angiosperm View MSA
121350076 5274 Embryophyte View MSA
123425500 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain