Gene : Thhalv10018572m.g E. salsugineum v1.0
Defline:  (1 of 19) PTHR11802:SF29 - SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED Genomic Order:  758
Name:  ? Thhalv10018572m.g Secondary Identifier:  ? PAC:20190831
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-3301 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10018572m.g 0.5kb upstream 0.5kb upstream 3235 true scaffold_9: 3213339-3216573 Eutrema salsugineum
Thhalv10018572m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 3216074-3216573 Eutrema salsugineum
Thhalv10018572m.g 0.5kb downstream 0.5kb downstream 3235 true scaffold_9: 3212839-3216073 Eutrema salsugineum
Thhalv10018572m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 3212839-3213338 Eutrema salsugineum
Thhalv10018572m.g 1.0kb upstream 1.0kb upstream 3735 true scaffold_9: 3213339-3217073 Eutrema salsugineum
Thhalv10018572m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 3216074-3217073 Eutrema salsugineum
Thhalv10018572m.g 1.0kb downstream 1.0kb downstream 3735 true scaffold_9: 3212339-3216073 Eutrema salsugineum
Thhalv10018572m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 3212339-3213338 Eutrema salsugineum
Thhalv10018572m.g 2.0kb upstream 2.0kb upstream 4735 true scaffold_9: 3213339-3218073 Eutrema salsugineum
Thhalv10018572m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 3216074-3218073 Eutrema salsugineum
Thhalv10018572m.g 2.0kb downstream 2.0kb downstream 4735 true scaffold_9: 3211339-3216073 Eutrema salsugineum
Thhalv10018572m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 3211339-3213338 Eutrema salsugineum
Thhalv10018572m.g 5.0kb upstream 5.0kb upstream 7735 true scaffold_9: 3213339-3221073 Eutrema salsugineum
Thhalv10018572m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 3216074-3221073 Eutrema salsugineum
Thhalv10018572m.g 5.0kb downstream 5.0kb downstream 7735 true scaffold_9: 3208339-3216073 Eutrema salsugineum
Thhalv10018572m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 3208339-3213338 Eutrema salsugineum
Thhalv10018572m.g 10.0kb upstream 10.0kb upstream 12735 true scaffold_9: 3213339-3226073 Eutrema salsugineum
Thhalv10018572m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 3216074-3226073 Eutrema salsugineum
Thhalv10018572m.g 10.0kb downstream 10.0kb downstream 12735 true scaffold_9: 3203339-3216073 Eutrema salsugineum
Thhalv10018572m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 3203339-3213338 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378201 5261 Brassicaceae View MSA
123841552 5264 Brassicales-Malvales View MSA
124347801 5266 SBM View MSA
124254219 5268 Malvidae View MSA
124073941 5270 Rosid View MSA
123747460 5271 Pentapetalae View MSA
122796815 5272 Eudicot View MSA
122050629 5273 Angiosperm View MSA
121312037 5274 Embryophyte View MSA
123349249 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain