Gene : Thhalv10011470m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR11451:SF21 - BIFUNCTIONAL GLUTAMATE/PROLINE--TRNA LIGASE Genomic Order:  706
Name:  ? Thhalv10011470m.g Secondary Identifier:  ? PAC:20184668
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum TRNA-CHARGING-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10011470m.g 0.5kb upstream 0.5kb upstream 2353 true scaffold_7: 4307814-4310166 Eutrema salsugineum
Thhalv10011470m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 4307814-4308313 Eutrema salsugineum
Thhalv10011470m.g 0.5kb downstream 0.5kb downstream 2353 true scaffold_7: 4308314-4310666 Eutrema salsugineum
Thhalv10011470m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 4310167-4310666 Eutrema salsugineum
Thhalv10011470m.g 1.0kb upstream 1.0kb upstream 2853 true scaffold_7: 4307314-4310166 Eutrema salsugineum
Thhalv10011470m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 4307314-4308313 Eutrema salsugineum
Thhalv10011470m.g 1.0kb downstream 1.0kb downstream 2853 true scaffold_7: 4308314-4311166 Eutrema salsugineum
Thhalv10011470m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 4310167-4311166 Eutrema salsugineum
Thhalv10011470m.g 2.0kb upstream 2.0kb upstream 3853 true scaffold_7: 4306314-4310166 Eutrema salsugineum
Thhalv10011470m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 4306314-4308313 Eutrema salsugineum
Thhalv10011470m.g 2.0kb downstream 2.0kb downstream 3853 true scaffold_7: 4308314-4312166 Eutrema salsugineum
Thhalv10011470m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 4310167-4312166 Eutrema salsugineum
Thhalv10011470m.g 5.0kb upstream 5.0kb upstream 6853 true scaffold_7: 4303314-4310166 Eutrema salsugineum
Thhalv10011470m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 4303314-4308313 Eutrema salsugineum
Thhalv10011470m.g 5.0kb downstream 5.0kb downstream 6853 true scaffold_7: 4308314-4315166 Eutrema salsugineum
Thhalv10011470m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 4310167-4315166 Eutrema salsugineum
Thhalv10011470m.g 10.0kb upstream 10.0kb upstream 11853 true scaffold_7: 4298314-4310166 Eutrema salsugineum
Thhalv10011470m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 4298314-4308313 Eutrema salsugineum
Thhalv10011470m.g 10.0kb downstream 10.0kb downstream 11853 true scaffold_7: 4308314-4320166 Eutrema salsugineum
Thhalv10011470m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 4310167-4320166 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121509661 5273 Angiosperm Singleton cluster - no MSA
122359163 5261 Brassicaceae Singleton cluster - no MSA
123797057 5264 Brassicales-Malvales Singleton cluster - no MSA
124294786 5266 SBM Singleton cluster - no MSA
124147283 5268 Malvidae Singleton cluster - no MSA
123873481 5270 Rosid Singleton cluster - no MSA
123457555 5271 Pentapetalae Singleton cluster - no MSA
122492971 5272 Eudicot Singleton cluster - no MSA
120782786 5274 Embryophyte Singleton cluster - no MSA
122824824 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain