Gene : Thhalv10005523m.g E. salsugineum v1.0
Defline:  (1 of 2) PF00077 - Retroviral aspartyl protease (RVP) Genomic Order:  1990
Name:  ? Thhalv10005523m.g Secondary Identifier:  ? PAC:20198874
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10005523m.g 0.5kb upstream 0.5kb upstream 2321 true scaffold_6: 14034392-14036712 Eutrema salsugineum
Thhalv10005523m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 14034392-14034891 Eutrema salsugineum
Thhalv10005523m.g 0.5kb downstream 0.5kb downstream 2321 true scaffold_6: 14034892-14037212 Eutrema salsugineum
Thhalv10005523m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 14036713-14037212 Eutrema salsugineum
Thhalv10005523m.g 1.0kb upstream 1.0kb upstream 2821 true scaffold_6: 14033892-14036712 Eutrema salsugineum
Thhalv10005523m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 14033892-14034891 Eutrema salsugineum
Thhalv10005523m.g 1.0kb downstream 1.0kb downstream 2821 true scaffold_6: 14034892-14037712 Eutrema salsugineum
Thhalv10005523m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 14036713-14037712 Eutrema salsugineum
Thhalv10005523m.g 2.0kb upstream 2.0kb upstream 3821 true scaffold_6: 14032892-14036712 Eutrema salsugineum
Thhalv10005523m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 14032892-14034891 Eutrema salsugineum
Thhalv10005523m.g 2.0kb downstream 2.0kb downstream 3821 true scaffold_6: 14034892-14038712 Eutrema salsugineum
Thhalv10005523m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 14036713-14038712 Eutrema salsugineum
Thhalv10005523m.g 5.0kb upstream 5.0kb upstream 6821 true scaffold_6: 14029892-14036712 Eutrema salsugineum
Thhalv10005523m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 14029892-14034891 Eutrema salsugineum
Thhalv10005523m.g 5.0kb downstream 5.0kb downstream 6821 true scaffold_6: 14034892-14041712 Eutrema salsugineum
Thhalv10005523m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 14036713-14041712 Eutrema salsugineum
Thhalv10005523m.g 10.0kb upstream 10.0kb upstream 11821 true scaffold_6: 14024892-14036712 Eutrema salsugineum
Thhalv10005523m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 14024892-14034891 Eutrema salsugineum
Thhalv10005523m.g 10.0kb downstream 10.0kb downstream 11821 true scaffold_6: 14034892-14046712 Eutrema salsugineum
Thhalv10005523m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 14036713-14046712 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028362 5273 Angiosperm View MSA
122359776 5261 Brassicaceae View MSA
123797615 5264 Brassicales-Malvales View MSA
124295334 5266 SBM View MSA
124253882 5268 Malvidae View MSA
124040401 5270 Rosid View MSA
123751157 5271 Pentapetalae View MSA
122773930 5272 Eudicot View MSA
121297863 5274 Embryophyte View MSA
123335877 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain