Gene : Thhalv10004074m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR31209:SF0 - COFACTOR-INDEPENDENT PHOSPHOGLYCERATE MUTASE Genomic Order:  1296
Name:  ? Thhalv10004074m.g Secondary Identifier:  ? PAC:20200232
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum GLUCONEO-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-1042 Eutrema salsugineum pathologic  
Esalsugineum PWY-5464 Eutrema salsugineum pathologic  
Esalsugineum PWY-5723 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10004074m.g 0.5kb upstream 0.5kb upstream 2783 true scaffold_6: 5207187-5209969 Eutrema salsugineum
Thhalv10004074m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 5209470-5209969 Eutrema salsugineum
Thhalv10004074m.g 0.5kb downstream 0.5kb downstream 2783 true scaffold_6: 5206687-5209469 Eutrema salsugineum
Thhalv10004074m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 5206687-5207186 Eutrema salsugineum
Thhalv10004074m.g 1.0kb upstream 1.0kb upstream 3283 true scaffold_6: 5207187-5210469 Eutrema salsugineum
Thhalv10004074m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 5209470-5210469 Eutrema salsugineum
Thhalv10004074m.g 1.0kb downstream 1.0kb downstream 3283 true scaffold_6: 5206187-5209469 Eutrema salsugineum
Thhalv10004074m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 5206187-5207186 Eutrema salsugineum
Thhalv10004074m.g 2.0kb upstream 2.0kb upstream 4283 true scaffold_6: 5207187-5211469 Eutrema salsugineum
Thhalv10004074m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 5209470-5211469 Eutrema salsugineum
Thhalv10004074m.g 2.0kb downstream 2.0kb downstream 4283 true scaffold_6: 5205187-5209469 Eutrema salsugineum
Thhalv10004074m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 5205187-5207186 Eutrema salsugineum
Thhalv10004074m.g 5.0kb upstream 5.0kb upstream 7283 true scaffold_6: 5207187-5214469 Eutrema salsugineum
Thhalv10004074m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 5209470-5214469 Eutrema salsugineum
Thhalv10004074m.g 5.0kb downstream 5.0kb downstream 7283 true scaffold_6: 5202187-5209469 Eutrema salsugineum
Thhalv10004074m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 5202187-5207186 Eutrema salsugineum
Thhalv10004074m.g 10.0kb upstream 10.0kb upstream 12283 true scaffold_6: 5207187-5219469 Eutrema salsugineum
Thhalv10004074m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 5209470-5219469 Eutrema salsugineum
Thhalv10004074m.g 10.0kb downstream 10.0kb downstream 12283 true scaffold_6: 5197187-5209469 Eutrema salsugineum
Thhalv10004074m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 5197187-5207186 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381477 5261 Brassicaceae View MSA
123833203 5264 Brassicales-Malvales View MSA
124336436 5266 SBM View MSA
124239348 5268 Malvidae View MSA
124068115 5270 Rosid View MSA
123752475 5271 Pentapetalae View MSA
122786354 5272 Eudicot View MSA
122046055 5273 Angiosperm View MSA
121343817 5274 Embryophyte View MSA
123428865 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain