Gene : Thhalv10004121m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR11062//PTHR11062:SF43 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED Genomic Order:  882
Name:  ? Thhalv10004121m.g Secondary Identifier:  ? PAC:20200087
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5980 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10004121m.g 0.5kb upstream 0.5kb upstream 3170 true scaffold_6: 3540158-3543327 Eutrema salsugineum
Thhalv10004121m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 3540158-3540657 Eutrema salsugineum
Thhalv10004121m.g 0.5kb downstream 0.5kb downstream 3170 true scaffold_6: 3540658-3543827 Eutrema salsugineum
Thhalv10004121m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 3543328-3543827 Eutrema salsugineum
Thhalv10004121m.g 1.0kb upstream 1.0kb upstream 3670 true scaffold_6: 3539658-3543327 Eutrema salsugineum
Thhalv10004121m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 3539658-3540657 Eutrema salsugineum
Thhalv10004121m.g 1.0kb downstream 1.0kb downstream 3670 true scaffold_6: 3540658-3544327 Eutrema salsugineum
Thhalv10004121m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 3543328-3544327 Eutrema salsugineum
Thhalv10004121m.g 2.0kb upstream 2.0kb upstream 4670 true scaffold_6: 3538658-3543327 Eutrema salsugineum
Thhalv10004121m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 3538658-3540657 Eutrema salsugineum
Thhalv10004121m.g 2.0kb downstream 2.0kb downstream 4670 true scaffold_6: 3540658-3545327 Eutrema salsugineum
Thhalv10004121m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 3543328-3545327 Eutrema salsugineum
Thhalv10004121m.g 5.0kb upstream 5.0kb upstream 7670 true scaffold_6: 3535658-3543327 Eutrema salsugineum
Thhalv10004121m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 3535658-3540657 Eutrema salsugineum
Thhalv10004121m.g 5.0kb downstream 5.0kb downstream 7670 true scaffold_6: 3540658-3548327 Eutrema salsugineum
Thhalv10004121m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 3543328-3548327 Eutrema salsugineum
Thhalv10004121m.g 10.0kb upstream 10.0kb upstream 12670 true scaffold_6: 3530658-3543327 Eutrema salsugineum
Thhalv10004121m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 3530658-3540657 Eutrema salsugineum
Thhalv10004121m.g 10.0kb downstream 10.0kb downstream 12670 true scaffold_6: 3540658-3553327 Eutrema salsugineum
Thhalv10004121m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 3543328-3553327 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368548 5261 Brassicaceae View MSA
123828903 5264 Brassicales-Malvales View MSA
124339349 5266 SBM View MSA
124238914 5268 Malvidae View MSA
124072198 5270 Rosid View MSA
123751032 5271 Pentapetalae View MSA
122797278 5272 Eudicot View MSA
122050562 5273 Angiosperm View MSA
121350610 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain