Gene : Thhalv10003717m.g E. salsugineum v1.0
Defline:  (1 of 2) 6.1.1.17 - Glutamate--tRNA ligase / Glutamyl-tRNA synthetase Genomic Order:  978
Name:  ? Thhalv10003717m.g Secondary Identifier:  ? PAC:20198437
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5188 Eutrema salsugineum pathologic  
Esalsugineum PWY-5918 Eutrema salsugineum pathologic  
Esalsugineum TRNA-CHARGING-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10003717m.g 0.5kb upstream 0.5kb upstream 3283 true scaffold_6: 3915062-3918344 Eutrema salsugineum
Thhalv10003717m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 3915062-3915561 Eutrema salsugineum
Thhalv10003717m.g 0.5kb downstream 0.5kb downstream 3283 true scaffold_6: 3915562-3918844 Eutrema salsugineum
Thhalv10003717m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 3918345-3918844 Eutrema salsugineum
Thhalv10003717m.g 1.0kb upstream 1.0kb upstream 3783 true scaffold_6: 3914562-3918344 Eutrema salsugineum
Thhalv10003717m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 3914562-3915561 Eutrema salsugineum
Thhalv10003717m.g 1.0kb downstream 1.0kb downstream 3783 true scaffold_6: 3915562-3919344 Eutrema salsugineum
Thhalv10003717m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 3918345-3919344 Eutrema salsugineum
Thhalv10003717m.g 2.0kb upstream 2.0kb upstream 4783 true scaffold_6: 3913562-3918344 Eutrema salsugineum
Thhalv10003717m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 3913562-3915561 Eutrema salsugineum
Thhalv10003717m.g 2.0kb downstream 2.0kb downstream 4783 true scaffold_6: 3915562-3920344 Eutrema salsugineum
Thhalv10003717m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 3918345-3920344 Eutrema salsugineum
Thhalv10003717m.g 5.0kb upstream 5.0kb upstream 7783 true scaffold_6: 3910562-3918344 Eutrema salsugineum
Thhalv10003717m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 3910562-3915561 Eutrema salsugineum
Thhalv10003717m.g 5.0kb downstream 5.0kb downstream 7783 true scaffold_6: 3915562-3923344 Eutrema salsugineum
Thhalv10003717m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 3918345-3923344 Eutrema salsugineum
Thhalv10003717m.g 10.0kb upstream 10.0kb upstream 12783 true scaffold_6: 3905562-3918344 Eutrema salsugineum
Thhalv10003717m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 3905562-3915561 Eutrema salsugineum
Thhalv10003717m.g 10.0kb downstream 10.0kb downstream 12783 true scaffold_6: 3915562-3928344 Eutrema salsugineum
Thhalv10003717m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 3918345-3928344 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381575 5261 Brassicaceae View MSA
123835075 5264 Brassicales-Malvales View MSA
124339524 5266 SBM View MSA
124249324 5268 Malvidae View MSA
124065023 5270 Rosid View MSA
123740640 5271 Pentapetalae View MSA
122787926 5272 Eudicot View MSA
122046625 5273 Angiosperm View MSA
121349445 5274 Embryophyte View MSA
123426828 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain