Gene : Thhalv10009827m.g E. salsugineum v1.0
Defline:  (1 of 2) PF00077 - Retroviral aspartyl protease (RVP) Genomic Order:  738
Name:  ? Thhalv10009827m.g Secondary Identifier:  ? PAC:20186746
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10009827m.g 0.5kb upstream 0.5kb upstream 2816 true scaffold_5: 5893927-5896742 Eutrema salsugineum
Thhalv10009827m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 5896243-5896742 Eutrema salsugineum
Thhalv10009827m.g 0.5kb downstream 0.5kb downstream 2816 true scaffold_5: 5893427-5896242 Eutrema salsugineum
Thhalv10009827m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 5893427-5893926 Eutrema salsugineum
Thhalv10009827m.g 1.0kb upstream 1.0kb upstream 3316 true scaffold_5: 5893927-5897242 Eutrema salsugineum
Thhalv10009827m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 5896243-5897242 Eutrema salsugineum
Thhalv10009827m.g 1.0kb downstream 1.0kb downstream 3316 true scaffold_5: 5892927-5896242 Eutrema salsugineum
Thhalv10009827m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 5892927-5893926 Eutrema salsugineum
Thhalv10009827m.g 2.0kb upstream 2.0kb upstream 4316 true scaffold_5: 5893927-5898242 Eutrema salsugineum
Thhalv10009827m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 5896243-5898242 Eutrema salsugineum
Thhalv10009827m.g 2.0kb downstream 2.0kb downstream 4316 true scaffold_5: 5891927-5896242 Eutrema salsugineum
Thhalv10009827m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 5891927-5893926 Eutrema salsugineum
Thhalv10009827m.g 5.0kb upstream 5.0kb upstream 7316 true scaffold_5: 5893927-5901242 Eutrema salsugineum
Thhalv10009827m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 5896243-5901242 Eutrema salsugineum
Thhalv10009827m.g 5.0kb downstream 5.0kb downstream 7316 true scaffold_5: 5888927-5896242 Eutrema salsugineum
Thhalv10009827m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 5888927-5893926 Eutrema salsugineum
Thhalv10009827m.g 10.0kb upstream 10.0kb upstream 12316 true scaffold_5: 5893927-5906242 Eutrema salsugineum
Thhalv10009827m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 5896243-5906242 Eutrema salsugineum
Thhalv10009827m.g 10.0kb downstream 10.0kb downstream 12316 true scaffold_5: 5883927-5896242 Eutrema salsugineum
Thhalv10009827m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 5883927-5893926 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028362 5273 Angiosperm View MSA
122359776 5261 Brassicaceae View MSA
123797615 5264 Brassicales-Malvales View MSA
124295334 5266 SBM View MSA
124253882 5268 Malvidae View MSA
124040401 5270 Rosid View MSA
123751157 5271 Pentapetalae View MSA
122773930 5272 Eudicot View MSA
121297863 5274 Embryophyte View MSA
123335877 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain