Gene : Thhalv10008131m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR10836:SF53 - GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPC2, CYTOSOLIC Genomic Order:  1921
Name:  ? Thhalv10008131m.g Secondary Identifier:  ? PAC:20186065
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum ANAEROFRUCAT-PWY Eutrema salsugineum pathologic  
Esalsugineum ANAGLYCOLYSIS-PWY Eutrema salsugineum pathologic  
Esalsugineum GLUCONEO-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-1042 Eutrema salsugineum pathologic  
Esalsugineum PWY-5464 Eutrema salsugineum pathologic  
Esalsugineum PWY66-399 Eutrema salsugineum pathologic  
Esalsugineum SUCSYN-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10008131m.g 0.5kb upstream 0.5kb upstream 3081 true scaffold_5: 10900678-10903758 Eutrema salsugineum
Thhalv10008131m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 10900678-10901177 Eutrema salsugineum
Thhalv10008131m.g 0.5kb downstream 0.5kb downstream 3081 true scaffold_5: 10901178-10904258 Eutrema salsugineum
Thhalv10008131m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 10903759-10904258 Eutrema salsugineum
Thhalv10008131m.g 1.0kb upstream 1.0kb upstream 3581 true scaffold_5: 10900178-10903758 Eutrema salsugineum
Thhalv10008131m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 10900178-10901177 Eutrema salsugineum
Thhalv10008131m.g 1.0kb downstream 1.0kb downstream 3581 true scaffold_5: 10901178-10904758 Eutrema salsugineum
Thhalv10008131m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 10903759-10904758 Eutrema salsugineum
Thhalv10008131m.g 2.0kb upstream 2.0kb upstream 4581 true scaffold_5: 10899178-10903758 Eutrema salsugineum
Thhalv10008131m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 10899178-10901177 Eutrema salsugineum
Thhalv10008131m.g 2.0kb downstream 2.0kb downstream 4581 true scaffold_5: 10901178-10905758 Eutrema salsugineum
Thhalv10008131m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 10903759-10905758 Eutrema salsugineum
Thhalv10008131m.g 5.0kb upstream 5.0kb upstream 7581 true scaffold_5: 10896178-10903758 Eutrema salsugineum
Thhalv10008131m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 10896178-10901177 Eutrema salsugineum
Thhalv10008131m.g 5.0kb downstream 5.0kb downstream 7581 true scaffold_5: 10901178-10908758 Eutrema salsugineum
Thhalv10008131m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 10903759-10908758 Eutrema salsugineum
Thhalv10008131m.g 10.0kb upstream 10.0kb upstream 12581 true scaffold_5: 10891178-10903758 Eutrema salsugineum
Thhalv10008131m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 10891178-10901177 Eutrema salsugineum
Thhalv10008131m.g 10.0kb downstream 10.0kb downstream 12581 true scaffold_5: 10901178-10913758 Eutrema salsugineum
Thhalv10008131m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 10903759-10913758 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381041 5261 Brassicaceae View MSA
123840158 5264 Brassicales-Malvales View MSA
124346732 5266 SBM View MSA
124250703 5268 Malvidae View MSA
124074393 5270 Rosid View MSA
123750297 5271 Pentapetalae View MSA
122795499 5272 Eudicot View MSA
122051601 5273 Angiosperm View MSA
121347451 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain