Gene : Thhalv10007853m.g E. salsugineum v1.0
Defline:  (1 of 4) PTHR22835//PTHR22835:SF189 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN Genomic Order:  600
Name:  ? Thhalv10007853m.g Secondary Identifier:  ? PAC:20185874
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-3301 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10007853m.g 0.5kb upstream 0.5kb upstream 2144 true scaffold_5: 5226768-5228911 Eutrema salsugineum
Thhalv10007853m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 5226768-5227267 Eutrema salsugineum
Thhalv10007853m.g 0.5kb downstream 0.5kb downstream 2144 true scaffold_5: 5227268-5229411 Eutrema salsugineum
Thhalv10007853m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 5228912-5229411 Eutrema salsugineum
Thhalv10007853m.g 1.0kb upstream 1.0kb upstream 2644 true scaffold_5: 5226268-5228911 Eutrema salsugineum
Thhalv10007853m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 5226268-5227267 Eutrema salsugineum
Thhalv10007853m.g 1.0kb downstream 1.0kb downstream 2644 true scaffold_5: 5227268-5229911 Eutrema salsugineum
Thhalv10007853m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 5228912-5229911 Eutrema salsugineum
Thhalv10007853m.g 2.0kb upstream 2.0kb upstream 3644 true scaffold_5: 5225268-5228911 Eutrema salsugineum
Thhalv10007853m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 5225268-5227267 Eutrema salsugineum
Thhalv10007853m.g 2.0kb downstream 2.0kb downstream 3644 true scaffold_5: 5227268-5230911 Eutrema salsugineum
Thhalv10007853m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 5228912-5230911 Eutrema salsugineum
Thhalv10007853m.g 5.0kb upstream 5.0kb upstream 6644 true scaffold_5: 5222268-5228911 Eutrema salsugineum
Thhalv10007853m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 5222268-5227267 Eutrema salsugineum
Thhalv10007853m.g 5.0kb downstream 5.0kb downstream 6644 true scaffold_5: 5227268-5233911 Eutrema salsugineum
Thhalv10007853m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 5228912-5233911 Eutrema salsugineum
Thhalv10007853m.g 10.0kb upstream 10.0kb upstream 11644 true scaffold_5: 5217268-5228911 Eutrema salsugineum
Thhalv10007853m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 5217268-5227267 Eutrema salsugineum
Thhalv10007853m.g 10.0kb downstream 10.0kb downstream 11644 true scaffold_5: 5227268-5238911 Eutrema salsugineum
Thhalv10007853m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 5228912-5238911 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374040 5261 Brassicaceae View MSA
123841139 5264 Brassicales-Malvales View MSA
124349912 5266 SBM View MSA
124249732 5268 Malvidae View MSA
124068482 5270 Rosid View MSA
123752448 5271 Pentapetalae View MSA
122797509 5272 Eudicot View MSA
122051674 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain