Gene : Thhalv10002409m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR24096:SF219 - LONG CHAIN ACYL-COA SYNTHETASE 8 Genomic Order:  133
Name:  ? Thhalv10002409m.g Secondary Identifier:  ? PAC:20196657
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Sequence Feature Displayer

Ontology Annotation Displayer

13 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-1121 Eutrema salsugineum pathologic  
Esalsugineum PWY-321 Eutrema salsugineum pathologic  
Esalsugineum PWY-5136 Eutrema salsugineum pathologic  
Esalsugineum PWY-5143 Eutrema salsugineum pathologic  
Esalsugineum PWY-5147 Eutrema salsugineum pathologic  
Esalsugineum PWY-5156 Eutrema salsugineum pathologic  
Esalsugineum PWY-561 Eutrema salsugineum pathologic  
Esalsugineum PWY-5885 Eutrema salsugineum pathologic  
Esalsugineum PWY-5971 Eutrema salsugineum pathologic  
Esalsugineum PWY-5989 Eutrema salsugineum pathologic  
Esalsugineum PWY66-389 Eutrema salsugineum pathologic  
Esalsugineum PWY-6733 Eutrema salsugineum pathologic  
Esalsugineum PWY-6803 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10002409m.g 0.5kb upstream 0.5kb upstream 4446 true scaffold_4: 4215495-4219940 Eutrema salsugineum
Thhalv10002409m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 4219441-4219940 Eutrema salsugineum
Thhalv10002409m.g 0.5kb downstream 0.5kb downstream 4446 true scaffold_4: 4214995-4219440 Eutrema salsugineum
Thhalv10002409m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 4214995-4215494 Eutrema salsugineum
Thhalv10002409m.g 1.0kb upstream 1.0kb upstream 4946 true scaffold_4: 4215495-4220440 Eutrema salsugineum
Thhalv10002409m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 4219441-4220440 Eutrema salsugineum
Thhalv10002409m.g 1.0kb downstream 1.0kb downstream 4946 true scaffold_4: 4214495-4219440 Eutrema salsugineum
Thhalv10002409m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 4214495-4215494 Eutrema salsugineum
Thhalv10002409m.g 2.0kb upstream 2.0kb upstream 5946 true scaffold_4: 4215495-4221440 Eutrema salsugineum
Thhalv10002409m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 4219441-4221440 Eutrema salsugineum
Thhalv10002409m.g 2.0kb downstream 2.0kb downstream 5946 true scaffold_4: 4213495-4219440 Eutrema salsugineum
Thhalv10002409m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 4213495-4215494 Eutrema salsugineum
Thhalv10002409m.g 5.0kb upstream 5.0kb upstream 8946 true scaffold_4: 4215495-4224440 Eutrema salsugineum
Thhalv10002409m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 4219441-4224440 Eutrema salsugineum
Thhalv10002409m.g 5.0kb downstream 5.0kb downstream 8946 true scaffold_4: 4210495-4219440 Eutrema salsugineum
Thhalv10002409m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 4210495-4215494 Eutrema salsugineum
Thhalv10002409m.g 10.0kb upstream 10.0kb upstream 13946 true scaffold_4: 4215495-4229440 Eutrema salsugineum
Thhalv10002409m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 4219441-4229440 Eutrema salsugineum
Thhalv10002409m.g 10.0kb downstream 10.0kb downstream 13946 true scaffold_4: 4205495-4219440 Eutrema salsugineum
Thhalv10002409m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 4205495-4215494 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362649 5261 Brassicaceae View MSA
123830994 5264 Brassicales-Malvales View MSA
124343221 5266 SBM View MSA
124243031 5268 Malvidae View MSA
124066498 5270 Rosid View MSA
123736490 5271 Pentapetalae View MSA
122788185 5272 Eudicot View MSA
122046932 5273 Angiosperm View MSA
121348478 5274 Embryophyte View MSA
123380877 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain